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GT16654

CSHL Arabidopsis genetrap mutant lines

Original: GT16654

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16654

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15140753 [Map]; Strand: c
      • AT4G31140.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: -447; Region: promoter
    Flanking Genome Sequence: GT16654 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACCCACA TGCCCCTGCC 
    TCACATCAAA CCATCTTTAT TTCGTAATAG CTAAATCTTA GACAGGCAAA 
    ATCTATCAAA TTTTAGAAAG TACTATTCAA AATTAATACT CTCTCATGTT 
    ACTACCATAC TTGCTGATTA TAATAACTGT AAACTATAAC AAAGATGGTA 
    AACCCAAATC TATATTTATG ATGGATTAAT TATTTTAAAG TATATATTGA 
    TGATTTTTTC TTTATAAATT ATCATGATTG CCGTATCGTA TAATTAATAG 
    ATTTGAGTGG TATTGTGAAG AGCTACTACA GCTAAGGAAG TAGACAACAC 
    CTAACGTAGT AAATTAAAAC ATTAATGTTT CTCTTTTAGT CCCTTTTTTT 
    TTGTTAATCG TTTTCATAAT ATTCTGCTAA TTAAATTTCG ATTGGGGGTA 
    CCAATCAAAA AGCAAACACC GCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15140740 [Map]; Strand: c
      • AT4G31140.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
        Distance: -460; Region: promoter
    Flanking Genome Sequence: GT16654 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCC 
    ACATGCCCCT GCCTCACATC AAACCATCTT TATTTCGTAA TAGCTAAATC 
    TTAGACAGGC AAAATCTATC AAATTTTAGA AAGTACTATT CAAAATTAAT 
    ACTCTCTCAT GTTACTACCA TACTTGCTGA TTATAATAAC TGTAAACTAT 
    AACAAAGATG GTAAACCCAA ATCTATATTT ATGATGGATT AATTATTTTA 
    AAGTATATAT TGATGATTTT TTCTTTATAA ATTATCATGA TTGCCGTATC 
    GTATAATTAA TAGATTTGAG TGGTATTGTG AAGAGCTACT ACAGCTAAGG 
    AAGTAGACAA CACCTAACGT AGTAAATTAA AACATTAATG TTTCTCTTTT 
    AGTCCCTTTT TTTTTGTTAA TCGTTTTCAT AATATTCTGC TAATTAAATT 
    TCGATTGGGG GTACCAATCA AAAAGCAAAC ACCGCCTTTC AGGTCCACTG 
    GAGACAGACA ATAAAAAAAC CTTTTTCGTT TATGTTCCAT GTCTGAAATT 
    AAAACATTTT CAAGTCTCGG GTATTTCAGA TTCTCCATCT AAGTTCTTGA 
    AACCTCTCCC TCTTCTTCTC CAAATTCCAC CTGAGAGAAG AGAACTTATT 
    CCACCCAAAA AGCAATAATA TATAGTACCG TACTTTGATT TTTTTGATAA 
    TCTGTTGATT GAAGTTAAGC CAAAACTCAG CTCTGTTCTT ATTCTTCTTC 
    AAACC

AT4G31140.1

Model type
Protein coding
Short Description
O-Glycosyl hydrolases family 17 protein
Computational Description
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, vacuole, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT5G58090.1); Has 2782 Blast hits to 2712 proteins in 151 species: Archae - 0; Bacteria - 6; Metazoa - 4; Fungi - 39; Plants - 2723; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR