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GT16679

CSHL Arabidopsis genetrap mutant lines

Original: GT16679

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16679

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17873170 [Map]; Strand: c
      • AT4G38050.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: -688; Region: promoter
      • AT4G38052.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -317; Region: promoter
    Flanking Genome Sequence: GT16679 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    TATGATACAG GACACGATAG ATTACAAGAG TATATACATC ACTCTCCTTT 
    TTTTGTATTT ACAAGACTTT ACATGAATTT CCAAACCAAT TGAAGAATCC 
    CACTCACACC ATCAATTTGA TCATCTTGAT AAATATCTTT AGCACTGCTT 
    TCGTATTCCT TTCTTTCCGG TTTTAATCCT TTTCCAGGAT CAATGTAATT 
    TGATATCCAC CTTCACTTCT TGGATTTTGA TCTGTTTTCT GAATGTAACC 
    AATCTTAAAG CTACTTCTNN TCNCATTCGA CCAACCAACC CCACAACTTC 
    TTTTTACTAT TTTTTTTTCC CTTTTTCTTG GACTTGATCC GTTTCCAGGA 
    TCAATGTAAG CAACTACCCA TCATCTTAAT CTAAACCATA AAACTACTTG 
    GGTTTTTTTT TGGGTCCCCC CTTTCCAATC CCCTTTTCCC CCTTTTTTGG 
    GGGTTTCCGG GAAAAATGTG TAACCCAAAA GAATTCTCCA AAGCGTTTAA 
    AACCTCCTTC CTCCTACTTA CTTCCCCAGG GAAAAACC

AT4G38050.1

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Computational Description
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: nucleobase-ascorbate transporter 12 (TAIR:AT2G27810.1); Has 9537 Blast hits to 9467 proteins in 1922 species: Archae - 69; Bacteria - 7876; Metazoa - 365; Fungi - 138; Plants - 431; Viruses - 1; Other Eukaryotes - 657 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38052.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR