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GT16687

CSHL Arabidopsis genetrap mutant lines

Original: GT16687

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16687

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21603697 [Map]; Strand: c
      • AT3G58400.1 - [+] show detail - TRAF-like family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16687 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGCAAGAAA 
    CACAAATAAT ATAAAAGAAT CAGCAAAACG AAGAAGAATA TAATATCCCC 
    TAAACCTAAA TCTTCTTACC ATTTGCAGCC ATCGACGACA AAAGGATGCA 
    GGGATACCCT CAAAAGGAGA ATCATCTCCG TAATCAAATT CTGGCTCCGA 
    CTCCTCTTCA TACGCAGAAT AATCACTCAT GTAGTTATCT GGATATGAAT 
    AATCACTATC ATATTCGTAC TCGCAGTCCT CTGATACGCG TTATCATGCT 
    GCAGCAAATC CTCTTTATAT GCATGACGAT CGTAATTCAT AAATCTTCTT 
    TAGTGCTTCT TCGTCAAAAA AGAAAATCTT CTTAATTTCC ATTACCATCC 
    TCACAACGCT GTTCCCCATC GAAATTATAG GAACCTCTCC CGTTCAAACT 
    GCAGAATGTA AAAAAGAAAC CAGAAATCAG TACTTTTAAA AGGAACATTG 
    TTTAAAATCA AACGGAGAAA AAAGAGATTA TACATACCAA GCTAGCTAGC 
    TAGGGAGTTT TATCTAATTC GTGAGTTTCT TCAGAATGCA AGAGATGGAT 
    ATATATAGGA TGATTAATGA TTGATACCAA AAATAAAGAA GGTGTGCGAA 
    TGTAAACAGC CTTTGCTCAT CGTAACTTGA CACTCTGCCA TAATATGCAG 
    AAAAAGCATG CGTCTCGAGA GAAGTGCTTG AATGCGAACA GCCTTTACAT 
    CAACGTGTTT ATTCTGCATG AATATGAACC AAAATATGAC AAATATCATG 
    AATATTAAAG AAGTCTACGT CGAGCCACGA GCCATGACTC TTC

AT3G58400.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: RESTRICTED TEV MOVEMENT 3 (TAIR:AT3G58350.1); Has 513 Blast hits to 461 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 505; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR