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GT16723

CSHL Arabidopsis genetrap mutant lines

Original: GT16723

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16723

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 532521 [Map]; Strand: w
      • AT3G02530.1 - [+] show detail - TCP-1/cpn60 chaperonin family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT16723 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAGCTCC 
    CAGAGAAGAA AAGCCCTAAA AGCCCCACTC CTCTTTCCAG TTTCTTTTGA 
    TCTCTCAGCA TCGAAAATGT CTGTGCGTGT ACTGAATCCT AATGCTGAGG 
    TGCTCAACAA ATCGGCCGCG CTTCTACTCA CTCTACAAGC CGCTAAGGGT 
    TTACAAGATG TACTCAAGTC GAATCTCGGT CCTAAGGGAA CTATCAAGAT 
    GTAAGTCTCT TCACTCTTGC TGGATCTATC TATTGTTTAT TCTCTNCACT 
    CGACGAAACN GAATTTTCAT GCCATTTTAT CGATCACTCC GGTGTGTAGG 
    CTTGTTGGTG GTTCCGGAGA TATCAAGCTT ACCAAGGATG GCAACACGCT 
    TTTGAAGGAA ATGGTAAGTC CGATAAAGAA ACAAAAATTT GTAGATCTTC 
    TTTTTTTGGT ATGGAAAAAA TGGTAGATCT TGTTGATTGA TTAGAATAAT 
    CTAGCTTAAT GTTTCATCTC ACTCAACAAT TCTGTCAATA AGCTTGTTTG 
    TAAAACGCTA GGGTTGTGCC TATTTGTTTG TTTTCAGAAA TTGAATTTGG 
    TAGGTTCTGG GCGAAGTCAT GTTAAAACCT AGTTAGGTTT AGGTTAGGCT 
    GTTTTTCAGA TTGGGACAGA AATAATAGAC ACAAATC

AT3G02530.1

Model type
Protein coding
Short Description
TCP-1/cpn60 chaperonin family protein
Computational Description
TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G16070.1); Has 18475 Blast hits to 17833 proteins in 3650 species: Archae - 805; Bacteria - 8777; Metazoa - 2106; Fungi - 1471; Plants - 861; Viruses - 0; Other Eukaryotes - 4455 (source: NCBI BLink).
Link
InterPro Scan - TAIR