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GT16755

CSHL Arabidopsis genetrap mutant lines

Original: GT16755

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16755

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 157994 [Map]; Strand: w
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.4 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G01320.1 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16755 - 3-prime edge 
    ATGAAACGGT AGAGGATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
    GGGCTCTGGC TGCGGTGGCC GCCGCTCTGT TGGTCCGCCT CTTCGCTGGA 
    CCTGGCATCG CTCTCTTACC TGAAGACGAA GCTGAAGATG ATTACGCTGA 
    GACGGAAGAC GGTGGTGGTG ATTCAATTCG TCCGGTGACA ATCCGTTGGA 
    GGAACATCAC CTGCTCGCTC TCCGATAAGT CCTCCAAATC GGTGAGCACA 
    TTTCTCCTCC CTTCTGCAAG TTTCGATTGC GCGTATATTA GTCTTTCCAA 
    TTTCACGTTA ATAGCCGAAT CAGAATTGGT TGATTATGTG ATTCTCAGGT 
    GAGGTTTTTG TTGAAAAATG TATCCGGAGA AGCAAAACCT GGGAGGTTGC 
    TAGCGATTAT GGGTCCTTCT GGTTCTGGGA AAACAACATT GCTCAATGTT 
    TTAGCAGGAC AGCTTAGTTA TTTCCCCCTC TATGAATTTG TCAGGTCTCT 
    TGGAGGTTAA TGGCAAACCG AGCTCTAGCA AAGCTTATAA GTATGTCCTA 
    TGAGTTATAC AAAGTCTATA TTTGTGTGAA AATCTGATCA TTGTTTGAGA 
    GAGTTTCTTG CAATGGCAGG CTTGCGTTTG TGAGACAGGA GGATCTCTTC 
    TTTTCGCAGT TAACTGTCAG GGAAACACTT TCTTTTGCAG CCGAGCTTCA 
    GCTTCCGGAG ATCTCTTCTG CTGAGGAGAG GGATGAGTAT GTC

AT2G01320.1

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387535 Blast hits to 354405 proteins in 4108 species: Archae - 7090; Bacteria - 308145; Metazoa - 8600; Fungi - 6710; Plants - 5407; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.4

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR