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GT16764

CSHL Arabidopsis genetrap mutant lines

Original: GT16764

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16764

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 171169 [Map]; Strand: c
      • AT1G01460.1 - [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase, core
        Distance: 4; Region: intergenic
      • AT1G01470.1 - [+] show detail - Late embryogenesis abundant protein
        Distance: 977; Region: intergenic
    Flanking Genome Sequence: GT16764 - 5-prime edge 
    CTCTTTCTCC CTGCAAACAA TAAACTTTCG CTAAACTAAA TAAATAGTGG 
    ATATAAGTAG AAATGTTAAG ACATGGAAGT TATGTATCAG TGAGAAGGAT 
    CTTCGTCTGG TAAGAAGATC TGAGAGACAA AGTCTTGGAA ACGAGAAGAA 
    TACATCTTGG GATGGACGGC TGAGATTGTC TTAGAGCTGT GTTGAATTGA 
    CTTGTAACAA TGTTCAAGGC GTTTTCTCAC ACCGTAGTCT TGGAAAATGT 
    CTATAATCCC AAGATACAAA ATCACATCGT ACCATTCTTC TCCTCCTTCT 
    CTGCTCTGTT TTCCCACCAC ACTCCCTGAT TCTCCTCTCC CAACCCGTCG 
    TGCTCGTCCT GGTATCTTCA TACCGAAGTT AGTGCTTGAG CTGCACGAAA 
    TCCCATTTTT TATAAACCCT AGTTGTGTGT TGGCAGTTTA GATGTGAACA 
    CAAGGACATG GAATTCTTAA AATTGGTTAC CTGTTTTGGA AGATGTTGGT 
    GAGATTTGTT TTCGAAACAA GGCTTTCATA TGGAGAATCA GAAGCGTTGG 
    TTTGTGCTGG ACTAGGGCTT ATACTTGCTA CTGATTGTAT ATTCACTGAG 
    TTCTCACTAT CAACTGAATC TATAAGAATG AAAATGAAGA AGATTCTTAT 
    GTTAGGGCAC GACAGGAGTT TTCTCTTTAT AGTATTTTAG ATTAGAAATT 
    GAAGATCATT TAGGGAAGGA TTCAAAAAAT TACTTCTGCT GGGAGTGCAT 
    GAATACATTG TAGAAGATGA TCTATCTGGA GAGTTTGAAG CTGTCTTCAT 
    AAACTTAGAG

AT1G01460.1

Model type
Protein coding
Short Description
Phosphatidylinositol-4-phosphate 5-kinase, core
Curator Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
Computational Description
PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01470.1

Model type
Protein coding
Short Description
Late embryogenesis abundant protein
Curator Summary
Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.
Computational Description
LATE EMBRYOGENESIS ABUNDANT 14 (LEA14); CONTAINS InterPro DOMAIN/s: Water stress and hypersensitive response domain (InterPro:IPR013990), Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (TAIR:AT2G46140.1); Has 340 Blast hits to 340 proteins in 93 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 329; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR