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Mutant Lines
GT16775

GT16775

CSHL Arabidopsis genetrap mutant lines

Original: GT16775

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16775

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 10383898 [Map]; Strand: w
- AT2G24430.1 - [+] show detail - NAC domain containing protein 38
  Distance: 0; Region: exon4 (CDS)
- AT2G24430.2 - [+] show detail - NAC domain containing protein 38
  Distance: 0; Region: exon3 (CDS)

CGGTAGAGGT ATTTTACCGA CCGGTACCGA CCGGTTTCAT CCCTACAAGA 
GCCTAAATAC TATCAACCAA CAACAATAAT CCTAATTACT CATCAGACCT 
CCATCAACTC CCACCGCATC TACAACCACA CCCGAGCCTC AATATTAACC 
AATCCTTCAT GGCACACGAC GATCACCTAG CTGAGCTCTC AAGAGTCTTC 
CGTGCCTCTA CAAGCACCAC CATGGACTCT TCTCATCAGC AGCTAATGAA 
CTACACCCAC ATGCCTGTCT CAGGGCTCAA CCTCAACCTT GGCGGTGCAC 
TGGTCCAGCC GCCTCCGGTT GTGTCTCTCG AGGATGTTGC CGCGGTTAGT 
GCTTCGTACA ATGGCGAAAT CGGGTTTGGA AATGTGGAGA TGAGCCAGTG 
CATGGACTTG GATGGATACT GGCCATCTTA TTGATTGGTA ATTGTCAGTT 
TAAGTTATGG TTTTTATATT GTTTCCATTT ACTTGTTGGT AAAACGTTTT 
TGGTTGTTCT TTCTATTGCA TTTGTTTACC TGTTCTAGGA AAATATTAAG 
AATCAAAGAC TAGTCAAACC AATTATGGTC TGGCTCTATG ATTTTTAGTT 
ACAAATAAAA TAAAAGCTGC AAGAATTCCC AATTTGGTTT CGATTTTTGA 
GAAAAAGTTT TCAAAAAGAT AAAAGACAAA GAGTGATTGC TTTTAAAGAG 
TAATGGCACA AGTACCAAAT TTATCCACAT GAATCACAAA ATACACAAAC 
CAAGCCCTTA GTAGATTTCC TCTAGATGTC AATCTTCTCT GTAT

5 prime edge [+] show sequence

Chromosome: 2; Position: 10383953 [Map]; Strand: w
- AT2G24430.1 - [+] show detail - NAC domain containing protein 38
  Distance: 0; Region: exon4 (CDS)
- AT2G24430.2 - [+] show detail - NAC domain containing protein 38
  Distance: 0; Region: exon3 (CDS)

TCCTACTTTC TCCCTGGGCT CTTGTGTGGT TGTTGTGGTG ATGACTTGTG 
CTGCTGCTAC TGGTGCTTAT GTATTTCTTG GTTGCTTCTG TTTTCTTGAA 
CACTCTACAC ACTACCCACT CGTCTTGCTG CATTTACATG TTACATCATG 
AAAAATGAAA TGAGAATTGT TGAGTTTATG TATATTCTTC TTGTGAAACA 
CTAATCCCAC AAAAAAAAAA AACACTTTCA AAACCCGTTT TAAAATCTGG 
CCCTGGACAA AGGGTATTTT GGGAAAAAAA AAACCAAGGG AAAAAGGGGT 
CCCTGGGAGG TTTTATTTAA GGCTTGGGAG GGAATCCAAA CCTCTGGCTG 
GCCCCAAAAG GTTTTCCCCC CCAAAGAAGT TCCCCCTTTG AAAAAAACAA 
A

AT2G24430.1

Model type: Protein coding
Short Description: NAC domain containing protein 38
Computational Description: NAC domain containing protein 38 (NAC038); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G24430.2

Model type: Protein coding
Short Description: NAC domain containing protein 38
Computational Description: Arabidopsis NAC domain containing protein 39 (ANAC039); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 58 (TAIR:AT3G18400.1); Has 3031 Blast hits to 3023 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 3020; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR