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GT16782

CSHL Arabidopsis genetrap mutant lines

Original: GT16782

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16782

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29525690 [Map]; Strand: w
      • AT1G78476.1 - [+] show detail - unknown protein.
        Distance: 0; Region: intron4 (CDS)
      • AT1G78480.1 - [+] show detail - Prenyltransferase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16782 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAGACCGCC 
    GCTTCCTGGG GGTTACGTGC TGAAAGCCAG AGCTTTAGTG TTCTGCACCG 
    CACTGAATTA CATAGGCTTG CGAATACTCC GAGAACGTCC TGATGAAGGA 
    CGACAATATG CATGTAAACT GACAAGTAAG ATGGCTTGGA TCGCGACGAT 
    TTGGCTCATC AACCACAGTG AAAGATGTTT CCCATCCATC TAGTTCTTCC 
    AACTAATCTT GAACCTCGTC GCGCACTTTT TCTTGCTCCA GTGTACTCTG 
    TTGTGCATCG CGTCACAACC CCAAACCTTG CCCCCTCACT GACCACCTCA 
    TCGCTGCCCC ATCACCTATC TATGAAAGAG ATTAAGAGAA GATGTCGAAA 
    TAGTATTTCC AGAGGAGTGG TGCAGCGTTT CTTAAAGATG TTGATGGTGA 
    ATACAAACGA AGCAGCTTGT TTGTTGACAT CGGTCTAGCT CAAACCATAC 
    GTATTTGCAA AGATGTTTTG GTTTGAACTA GACCGAGTAC AACAAACAAA 
    CTCCTCCGTT TGTTTTCACG ATCACCATCT GTAAGAGTAC CATCTACGTC 
    CAAAGATGTT GCCTCTAGAA AGCCTATTTT GGCATCTTTT CTTGCAAAGA 
    TATGTGAAAG AGAAACGTGT GTCCATAAGT GTAGCAATAT TTTCAAATAT 
    TCAGATGATT CAAGCGAATA AAAAAAAGGA ATCAAAATAA ATGG

AT1G78476.1

Model type
Protein coding
Computational Description
unknown protein.
Link
InterPro Scan - TAIR

AT1G78480.1

Model type
Protein coding
Short Description
Prenyltransferase family protein
Computational Description
Prenyltransferase family protein; FUNCTIONS IN: catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: lupeol synthase 2 (TAIR:AT1G78960.1); Has 675 Blast hits to 672 proteins in 191 species: Archae - 0; Bacteria - 5; Metazoa - 65; Fungi - 169; Plants - 397; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Link
InterPro Scan - TAIR