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GT16785

CSHL Arabidopsis genetrap mutant lines

Original: GT16785

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16785

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3858361 [Map]; Strand: w
      • AT3G12110.1 - [+] show detail - actin-11
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16785 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACCAACCA 
    TGACACCAGT GTGTCGAGGA CGACCAACGA TGCTAGGGAA TACAGCTCTT 
    GGTGCATCAT CTCCAGCAAA TCCAGCCTAA GGAATTGGAA ACACATATGA 
    ATGAACCAGA CAAAACAGCA TTGTATCCAA AAATAATAAA AGAAAAAGTT 
    ATCAGATTTA TATCCACAAA GGTCATGTAA AGATGTACCT TAACCATTCC 
    GGTTCCATTG TCACAGACGA GAGGCTGAAT GTCTTCACCA TCTGCCATTT 
    TCTATATCCT GTCAAAATTG ATATAAAAAA TATTAGCATA ATTGAACCCT 
    TTATTTTGCA AGAAACAGAG GAATCTTAAG ATCTACCAAA GAGAATTAAA 
    TTGAAAAAGC TTCATAAACG CATACTAATG AAGAATCAAT GACGATGGAA 
    CGTTATGGAA ATGTGATTAC CTTAGAAGTT AGAGAGGGGA TCTCTGAGGA 
    AACGAGGAGG GTGGTGGTGT GGTACGGGTG TGTAGTTTTT GAGAGAGAAA 
    CGGAGCGAAT G

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3858659 [Map]; Strand: w
      • AT3G12110.1 - [+] show detail - actin-11
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT16785 - 5-prime edge 
    ATGACTCAGA TTATGTTTGA AACTTTCAAC ACTCCTGCCA TGTATGTCGC 
    TATCCAAGCT GTTCTTTCCC TCTACCCAAG TGGTCGTACT ACTGGTAATA 
    AGATCTTCAA CACCTACACC ATTTTTTTAA TCACTACTAC CCATTGCATT 
    GAACAAACTT CAAGGTCTTC TTAGCTTCAG ATTAAGAAAG TACCCTTTCT 
    TGGCTTTGTT GATGTGGTAC CATTGGCCAT TGTCTTGTGT GTTTCCAGGT 
    ATTGTGTTGG ATTCTGGAGA TGGTGTGAGT CACA

AT3G12110.1

Model type
Protein coding
Short Description
actin-11
Curator Summary
Encodes an actin that is expressed predominantly during reproductive development.
Computational Description
actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink).
Link
InterPro Scan - TAIR