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GT16827

CSHL Arabidopsis genetrap mutant lines

Original: GT16827

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16827

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1984686 [Map]; Strand: c
      • AT3G06470.1 - [+] show detail - GNS1/SUR4 membrane protein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16827 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTACTTAT 
    GGATGGGTGA GATTGAGTGT AATTTGGTCT TACCAGTTTC TGGAACGGCC 
    ACAATGTCTT CTTGTTCTCG TTTCAGTGTC ACTCGACTAA TGTACGGTTA 
    CTACTTCCTC TGCGCCGTTG GATCGAGGCC CAAGTGGAAG AGATTGGTGA 
    CGGATTGTCA GATTGTTCAG TTTGTTTTCA GTTTCGGGTT ATCCGGTTGG 
    ATGCTCCGAG AGCACTTATT CGGGTCGGGT TGCACCGGGA TTTGGGGATG 
    GTGTTTCAAC GCTGCATTTA ATGCTTCTCT TTTGGCTCTC TTTTCCAACT 
    TCCATTCAAA GAATTATGTC AAGAAGCCAA CGAGAGAGGA TGGCAAAAAA 
    AGCGATTAGA TTGGTTTCTT GGACAATAAG TAAAACCTCT CATTGTGTCT 
    TGAATTGTTG ATTAGTTTCC ACACAAAAGG ATTAATTGTC TTGAATTGTT 
    GTTTATTTTG AAATTTTTGT CTGTGTTGTA CTTGCAAATG TTGAGATACT 
    TTTGTACTTG TATGAATATA AGATGACAGA AAATATCAAA ATATCACAAA 
    AGTCATGACA TGGACTCATC ATCTCTAATT CTTTGACTGA AAAGTACGTT 
    CAATCTAAAG AATTCATGCA ATGATGTAAG CAAGAATTGA ATTTAAACAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1984621 [Map]; Strand: c
      • AT3G06470.1 - [+] show detail - GNS1/SUR4 membrane protein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16827 - 5-prime edge 
    CTTTCTCCGT CGCGTGGTGG TACCGAGGAG GAAGGTAGCC GTTGGATTGA 
    TTTGCCGAGT ATGATGAGGA TCGTGTCTCC GAACTCGAGG ATCTTCGAGA 
    GGTAGAAGAC TTGAGCCCAG AAGAAAAGCG GTCCGTTAGG TTTAACGTCG 
    ACGGGAAAGC AAATCGCGTG AAGGAAACGC GCCATCGGAT CTGAAGACGC 
    GTGAGATGAG GTTATTGAGA GAGTGCAACC GACGGCCATG ACTGAGGAGA 
    GGAGACAGAG GATTAGGCTG TGGACGGCTG TGATCGGTTT GAGGATACGT 
    GGACTGAGTG ATGGGAGTGA ATCGATGGCG GATCGGAGGA GGAACGTGGC 
    GGAGAGGTAA ACGGAGACTA CGACGGATAC GAAAAAGACG GTGGAGCCTA 
    GGGTTTCACC TTCGATCCAA GTAAAATTGG AGATGTAGGG GTGGTTAACG 
    AGCCAGTAGG TTAAAGAGGA GTAAATTGAT GCCATAGCCT CCGGTGAATC 
    GCCGACGAAG TTTGGGGAGT TGACGTTTGA AGATATG

AT3G06470.1

Model type
Protein coding
Short Description
GNS1/SUR4 membrane protein family
Computational Description
GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink).
Link
InterPro Scan - TAIR