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GT16866

CSHL Arabidopsis genetrap mutant lines

Original: GT16866

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16866

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT16866 - 3-prime edge
    TTTTCTCCCG ATCCTCGGCA GGTTCCTCTA CTGTTTCA
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18733873 [Map]; Strand: c
      • AT3G50480.1 - [+] show detail - homolog of RPW8 4
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT16866 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACACACAT 
    GCATGCCTTT AAAAGCTGTG GCTCCAAAAT ATTTAGTTCA TTGTCTATCT
    GTCTTACTCT TTCATCTCAC TCGACTAATC TATAATGATA TTATGTTTAC
    TAAAAAGCTA TTGACCGCAA AGGAAAGGCT TGTAGCGGAG GGTTGCTTAG
    AACAAAAGGT GGAGCCACAT CTATACACAT AATGATATAA GAGATAAGTT
    GGAAACTAGA CACTTTTTTC ACAAATAATT TGTAAAGTAG GTAGTTTTTT
    TAGAAATAGG GAGAATAGAC ACTTTTCTCT TTCCTCTCTA ATACAACTTT
    CTATCTAATA GAGATTTTAG TGAATGACCT TTATAACCTT CTGCTGTTTT
    GTCATATAGT CAAATAAAGA CAAAAATTGT TATGAATAAA GATGGATGCC
    CATTATAAGG CCCATCATCT AAGCCTATCA TCTAGATGTT TCTAGGGTTT
    TACCCTTTCC TTATACTCCT ATATAAAGAA CCCTTTATCT TAATGGAATA
    ACACACTCAT TTCCTCTATC TCTTTCTCTG TTTATAACAC GTTATCAGCA
    CGCTCTAAAA AGTAGATATA GAGATTCTTA CATTTTTTTA AGAACCATGT
    TTACTTATCG ACTCATGGTT CATAGTACTT ATTTTCTATT ATTGAAACAA
    AACAATATGA GCCGATCGAT GATTATAGTA TAGATCG

AT3G50480.1

Model type
Protein coding
Short Description
homolog of RPW8 4
Curator Summary
Homolog of RPW8
Computational Description
homolog of RPW8 4 (HR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 106 Blast hits to 90 proteins in 15 species: Archae - 14; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR