1. Home
  2. Mutant Lines
  3. GT16913

GT16913

CSHL Arabidopsis genetrap mutant lines

Original: GT16913

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16913

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3500209 [Map]; Strand: c
      • AT3G11170.1 - [+] show detail - fatty acid desaturase 7
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT16913 - 3-prime edge
    AGCACACCAT TAACGACACC AATATTTGAG GAGTCTCCAT TGGAGGAAGA 
    TAATAAACAG AGATTCGATC CAGGTGCGCC TCCTCCGTTC AATTTAGCTG
    ATATTAGAGC AGCTATACCT AAGCATTGTT GGGTTAAGAA TCCATGGAAG
    TCTTTGAGTT ATGTCGTCAG AGACGTCGCT ATCGTCTTTG CATTGGCTGC
    TGGAGCTGCT TACCTCAACA ATTGGATTGT TTGGCCTCTC TATTGGCTCG
    CTCAAGGAAC CATGTTTTGG GCTCTCTTTG TTCAT

AT3G11170.1

Model type
Protein coding
Short Description
fatty acid desaturase 7
Curator Summary
Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.
Computational Description
fatty acid desaturase 7 (FAD7); FUNCTIONS IN: omega-3 fatty acid desaturase activity; INVOLVED IN: response to cold, response to wounding, fatty acid biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: plastid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3474 (InterPro:IPR021863), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 2938 Blast hits to 2935 proteins in 698 species: Archae - 0; Bacteria - 1234; Metazoa - 17; Fungi - 265; Plants - 926; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink).
Link
InterPro Scan - TAIR