1. Home
  2. Mutant Lines
  3. GT16918

GT16918

CSHL Arabidopsis genetrap mutant lines

Original: GT16918

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16918

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18672336 [Map]; Strand: c
      • AT2G45290.1 - [+] show detail - Transketolase
        Distance: -346; Region: promoter
    Flanking Genome Sequence: GT16918 - 3-prime edge 
    AAACGGTAGA GGTTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTG 
    AATTGGTGCC TAAAATGTAT TTCCTAAATC TAAAGCAATT TTGCCCCCAA 
    AAAAAAAAAA ATTCAAAGGA ATTTGGGTTT TCCCCAACCC TTGGTAAAAC 
    CCGGGGTTTT GGTTAAAAAC CCCACCCGGG CCGATTGGAA AACCTTTTTT 
    TCCCTAAAAT AAAATTTTTT TTTAAAAAAT AGGGGAAAAA GGAATGGTTT 
    TTTTAAAATT AAAAAAAAAA ATTTGGGTCC AAAAATTTGT AAAGCCCTTA 
    GACCTCCCCC CCCGCAAAAA TGGGGCCTTT TTGAAACCCA AGGGCAAAAT 
    GGAAATCCCT TGGGTTTTTA AAAAACAACA CCCCCCAAAA AAGGGTTGGA 
    AAAAAAGTTT CCCCTCCAAT TTCCCCCCCC CCAGTAACCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18672283 [Map]; Strand: c
      • AT2G45290.1 - [+] show detail - Transketolase
        Distance: -399; Region: promoter
    Flanking Genome Sequence: GT16918 - 5-prime edge 
    TCCTACTTTC TCCCTGCAAT TCACCAACTC CGGTATTGAC CCAGTCGGTG 
    ACGGCGTAGC TGACGAAACC TTTTTTTCTC TCAACATCCC ACGTTGCATA 
    GCACGTGTCT TTATTTTGCT CATTTTTTCT TGTTATGTTT GCAATTAGTG 
    GGCCTTCTTA TGACCTTCTT TTGTACCGAA TATTTGCCCA TTTGGGCTTT 
    ATGAAACAAT TGGGCCGAAA AAAACTCATG CAGTTTAATG GAATCAAGAA 
    CTGAACCAAA ACTAAACCGG AGAAAGCTTA CTCATGTCCT CGTGACTGTG 
    TCGTAGTGTG TCATTACATC ATCTTGACTC GCTTGCTACT CGAGGATGAG 
    TTTCTTAGAC CTCTACTGGT TACAGTGTAT GAAGCCGAAG CTGAAGGAAG 
    TGAAGGGGAC TTATCGATAT ATGCGTAACG CTCATCACCA TTCCAATACA 
    GAATGACTCG GTTGGTGCAC GAATGAGACC AGCTATCGCC TGAAAACAGC 
    ACAAGTTGAC CATTTAAGTA TCATAACAAA TGAATGATGA TGATGATAAT 
    AGCAAACTGA GATGGTAGAT TTGAGTTTGG CTCACCTAAA GCAAGCGCTA 
    GTTGAAACGA GCCTTCACTA AACTTTGTGG TCACCTGGTT TAGTAACACG 
    ACCTGAGATT GGATCATAAG AGTTGATTAG GAACCTCCAC TTAAGCTAGT 
    CAAGGATTGT ATTGTGAATT AGATC

AT2G45290.1

Model type
Protein coding
Short Description
Transketolase
Computational Description
Transketolase; FUNCTIONS IN: catalytic activity, transketolase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, bacterial-like (InterPro:IPR005478), Transketolase, N-terminal (InterPro:IPR005474), Transketolase, C-terminal (InterPro:IPR005476), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475), Transketolase binding site (InterPro:IPR020826); BEST Arabidopsis thaliana protein match is: Transketolase (TAIR:AT3G60750.1); Has 19460 Blast hits to 19400 proteins in 2776 species: Archae - 200; Bacteria - 11520; Metazoa - 310; Fungi - 312; Plants - 211; Viruses - 0; Other Eukaryotes - 6907 (source: NCBI BLink).
Link
InterPro Scan - TAIR