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GT16931

CSHL Arabidopsis genetrap mutant lines

Original: GT16931

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16931

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29978601 [Map]; Strand: c
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16931 - 3-prime edge 
    GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA GATGTATCAA 
    AGTACCAACC AAGCTCAATC ACCGTAAACC CATTAGTATA AAATTGTTCC 
    GGCTCTGTAA CATTCGCCGG AGAGTAAGTC TCATTCGTCA AGAAAGCAAC 
    TTTACAGTTT CCTCCTTGAG TTGTGTTACC ACCGGAGCTT TCAAGGTCAA 
    CGCCGATTAC TTGCGGTCTA TCCGCCGGAA TCTTCGCCTG ACAACATGTG 
    TAACCACCGC AGATCTTGTC TAAACGACTC TTATCTCCGT CGCAGCTCGA 
    TTCGCATCCT GTGATCTGAG ATTCGATGTC TGTAATCAAT GCTCTGTTGT 
    CACAACCAAC TGAGACGAGA CGATCCGAGT CGGTGATGAA AAAGGGACTT 
    CCTTTACCGG TGAGGTTTAA AGGAAGAGGT TTTACGGGTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29978536 [Map]; Strand: c
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16931 - 5-prime edge 
    ACTTTCTCCC TGGATACTCA GATTCTCGGT TAACGAATCC TGTGGGTTGT 
    GTGAATTTGA CGGAAACAGG GATTTACACG AGCGCACCGA GCTGTGTTTG 
    TGAGTATGGT AACTTCTCTG GCTTTGGTTA CAGTAACTGT TACTGCAATC 
    AGATTGGTTA CAGAGGGAAT CCTTATCTTC CTGGTGGATG CATTGGTAAG 
    ATTTATGTGT TTCTTCGTCT ATTTGGCTTC AATGGGGTTT TAATTAAGTG 
    ATTACGGATG TGTTGATTCA GCCTTTTTTG TTCATTTTGT TTTTAAGACA 
    TTGACGAATG TGAGGAAGGA AAAGGACTAA GCAGCTGTGG AGAACTAACT 
    TGTGTGAATG TTCCTGGATC GTGGAGGTGC GAGCTGAATG GAGTAGGGAA 
    GATCAAGCCT CTGTTTCCAG GTGAATCAAT GGAGTTCTTT TCCAGATTCC 
    AAAGTCATAT CACAGAGCAA AAAAGAGTGA TGATCTTTAT AGTTTTCTTT 
    CGTCCTTGTG CAGGTCTTGT TCTAGGTTTT CCACTG

AT1G79670.1

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120817 Blast hits to 119164 proteins in 4285 species: Archae - 142; Bacteria - 13548; Metazoa - 44699; Fungi - 10352; Plants - 33861; Viruses - 488; Other Eukaryotes - 17727 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79670.2

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink).
Link
InterPro Scan - TAIR