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GT16944

CSHL Arabidopsis genetrap mutant lines

Original: GT16944

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16944

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26784058 [Map]; Strand: w
      • AT1G71010.1 - [+] show detail - FORMS APLOID AND BINUCLEATE CELLS 1C
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT16944 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTACTGCCG CCTGCACGAG 
    TATCCGGCTT TACAAAATTT GCAGCTTGCC ACGCTAAAGC AGTGACAATA 
    TCCAGCCACT CCCCGGCACT GCCATCATCA GATGGACTTA GCTCCTCCCC 
    ACGTAATAGC TCTGCAACAA GAGCTCGGAA GTGGTCATGC ACCACGGTTC 
    GAAGAGGTTC ATTGCTGTTT TCTCCCAATT TCTCTCTGGT AGGAATGTGG 
    CTAGAAAAGC TACTACTCAA TGAAAACTCG GTAGCAGAGT CCCCAATATC 
    GTCATCTTCG TCATCATAAT GAAAGTAATT ACTCTCAGCA TCATCATTCT 
    CATCTTCCGG TGGTGGAGGA TACCAGATGC GGCCGTTGTT CTCAAAATCC 
    AACGGCTGTT GCAACTTATC CTCTTCCTCC TCGTGATCTT CCTGTTCCAA 
    TACCCCCTGA CCTGGCTTAA CTAAATTATC AGCCAAGAGT TGTTCTTGAT 
    GATTATCAAA AGAACAAACA GTAGGGCTTC TTAGGTCTTT CGCGTGCTGT 
    ACAAAGCGCC CAAGAGGACT AAAATTGTTC CTTAATGGAC TGTCGTGAGG 
    ACTGGACCCA GCAGAAGATT TACAACTAAA AAGCTCATGT CTAGCACTAA 
    CACTACCCGA CTCTATATCT GAACTGTCCT GATAGTTATC ACTCGAAGGG 
    CTTAACAACT GTTTACCACA ATATCTAGCC TCTTCTTCCT CTCCCCTGCA 
    AACACAAATC ATTCACTTAC TCCAACATGT TTAAAGACTC ATAATTGAAC 
    ATAAAAATTG AATCTTTTTC CACATAATTG AATGTAAAAA TCGAAACTTT 
    ACCTGCTAGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26784151 [Map]; Strand: w
      • AT1G71010.1 - [+] show detail - FORMS APLOID AND BINUCLEATE CELLS 1C
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT16944 - 5-prime edge 
    GGATCCCGGG AATTATGTAA AAATAAAATG TGTAGCATCT GGAAATCAAA 
    ATGAGAGGTA TAACTAGTTG TTGAAACCTT GTTTAAATCG TCCTCTGACT 
    GATGATTACT AATTTGGGTG ATAGTTACTA AATGAATACC TTGTTTCTGC 
    AGCATTCTCA TCAGGGGAAT AGTGTGTAGC AAGAACATTA CGCACAAGCG 
    AATGATATCG CAGTACAAAA ATCCAAGGGT GATGCTTTTA GCTGGTTCTC 
    TTGAGTATCA GAGAGTTGCA GGCCAATTAG CATCCTTTAA CACGTTGCTT 
    CAACAGGTTG GTGTGTTACT GTTTCTTTAT GATGGCTGCA TAAAATCTCT 
    GATTAACAAA CTGAACAACT GAATTATGTG TGTTGGACAG GAAAATGAAC 
    ATATGAAGGC GATAATAGCA AAAATAGAGT CCCTTCGTCC TAATGTTCTG 
    CTGGTAGAGA AAAGTGCATC TTCATATGCC CAGCAATACC TTCTAGAGAA 
    GGAAATTTCA TTGGTGCTCA ATGTGAAAAG GTCATTGCTG GACCGTATAG 
    CCCGTTGCAC TGGTGCTGTT CTTTGCCCCT CACTAGATAG TATTAGTACT 
    GCTCGATTGG GTCACTGTGA GCTGTTCCGG ACTGAGAGAG TGTTGGAGCA 
    ACATGAAGCT GGCAATCAGT CAAACAGAAA ACCATCAAGG ACATTGATGT 
    ACTTTGAAGG GTGTCCTAGG CGCCTAGGTT GCACGGTATG CTCCTTTATT 
    GGTTTC

AT1G71010.1

Model type
Protein coding
Short Description
FORMS APLOID AND BINUCLEATE CELLS 1C
Curator Summary
Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
Computational Description
FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 4961 Blast hits to 4644 proteins in 430 species: Archae - 584; Bacteria - 4; Metazoa - 1658; Fungi - 1043; Plants - 685; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink).
Link
InterPro Scan - TAIR