Home
Mutant Lines
GT16998

GT16998

CSHL Arabidopsis genetrap mutant lines

Original: GT16998

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT16998

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 801015 [Map]; Strand: c
- AT4G01850.2 - [+] show detail - S-adenosylmethionine synthetase 2
  Distance: -2735; Region: intergenic
- AT4G01860.2 - [+] show detail - Transducin family protein / WD-40 repeat family protein
  Distance: 17; Region: intergenic

TTTACCGACC GTTACCGACC GTTTTCATCC CTAGAAGCAC GATACAGTCG 
ACCGTTAGTG AATCTTAAAA TAATATCATC AATGAGTGTT TCTTGGGTGT 
ATAAAATTAG TGAAAAGATG TGAAGATTTT ATAAACATTA AACTTTCGTG 
TCGTAAGAAA GTCACATAAT ACTGTAGTTA CAATATTAAT CTTACCAAAA 
ACGTAGAATG AAATCGAAGT TTCATAAACA ATTATACATG TATGAAAAAG 
TATATGATCT ACTATATATA TAAATCGAAC TTTGACGGAT GTATCACAAA 
ATTAATGATA TCAAATATCT AAAGAAGTTG ATTACTATTA ATAAGTCGAA 
TTGGTTGATT AGAATTAAAT AAGGTCATGT GAAGTGTTGA TATTTCTCTC 
ATAAAGGTCC CACATTGGCA CAATTCCATA ACCAAAATCT TGAGCAATAA 
TAACGTTACT ATCAAATTGG GTTCAGAAAC ATGATACATA CCAGAATTTA 
GTAGAGCACC GACTTCGGCC AAAAAAAAGT AGATTCACCG ACAAAAGCTC 
AGTTCTCAGA TCAAACTGAA CCAAGAATCA AAATCCGGTT TACTCTGAC

5 prime edge [+] show sequence

Chromosome: 4; Position: 800677 [Map]; Strand: c
- AT4G01850.2 - [+] show detail - S-adenosylmethionine synthetase 2
  Distance: -2397; Region: intergenic
- AT4G01860.2 - [+] show detail - Transducin family protein / WD-40 repeat family protein
  Distance: 355; Region: intergenic

ACTTTCTCAT CCATACTATA TGGTCGCTCT TAATTGAGGT GTCGGTTCAA 
TTGTGATGAT TATTATATTC TAACTCTACC TAATTATACA AATTCTTAAT 
TTTATTTACA AAATATAAGA CACTTGAAGA TTTGCATATG GAATAGTAGT 
CGTGAAATTC AACGTTCTTA ATTACTTATT TAAAGTTATC GGATCGGAGA 
CGCCATTTCA TGAAACTAAC AAATGTCGTA AACTCGTAAT AGATATTAGA 
TAGTTCAAGA CTGGTAAAAA AAAAAAAAAA GGGGGGTTGA AACCCGGGCA 
AAACTTTTTT GGCCGGGGTT TTTTTTTGGG GGGGTTTCCC CGGGCTTCAA 
AAAAAATTTT TTTAA

AT4G01850.2

Model type: Protein coding
Short Description: S-adenosylmethionine synthetase 2
Computational Description: S-adenosylmethionine synthetase 2 (SAM-2); FUNCTIONS IN: methionine adenosyltransferase activity; INVOLVED IN: one-carbon metabolic process, S-adenosylmethionine biosynthetic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine synthetase (InterPro:IPR002133), S-adenosylmethionine synthetase superfamily (InterPro:IPR022636), S-adenosylmethionine synthetase, N-terminal (InterPro:IPR022628), S-adenosylmethionine synthetase, C-terminal (InterPro:IPR022630), S-adenosylmethionine synthetase, conserved site (InterPro:IPR022631), S-adenosylmethionine synthetase, central domain (InterPro:IPR022629); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine synthetase 1 (TAIR:AT1G02500.2); Has 10906 Blast hits to 10898 proteins in 2898 species: Archae - 12; Bacteria - 5497; Metazoa - 373; Fungi - 167; Plants - 706; Viruses - 1; Other Eukaryotes - 4150 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01860.2

Model type: Protein coding
Short Description: Transducin family protein / WD-40 repeat family protein
Computational Description: Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR