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GT17013

CSHL Arabidopsis genetrap mutant lines

Original: GT17013

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17013

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1663222 [Map]; Strand: c
      • AT1G05577.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: GT17013 - 3-prime edge 
    GAAACGGTAG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCTAG 
    CTACTTTGGA GCGTACCGAG CATTGTGCTG TTGGTGGTAT TGGTATCTGC 
    GTTCATCTTC CCAAGCCGGA CCAAAAGCCC CAGACCTAGA CTTATTCAAA 
    GGCACCAATA CGGCGTCGTT TGTGTCCAAA CCACCACACT TCATCAAGTT 
    CCGTAACACG TGAGAGGCAC GTACGCTCGA ATAGCTCTTA TTCTTGATAT 
    AACTCGAAGA CGACGTCGTA GACGATACAC TTGGTCGACC CGACTCCACA 
    TCGTTACCCG ACCCGTTCTC CGTCGAACCG TCTCTCTGGC CGGAGACTGT 
    TTTCGGATCT TGTTTCTTAA GAACGAAACC TTCTTCGTTC GTGGTGGATT 
    CCTCCGTGAC TGTCGACGTT GTTGCCGTCC ATCTCTGTGA GCAGA

AT1G05577.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 167 Blast hits to 166 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR