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GT17061

CSHL Arabidopsis genetrap mutant lines

Original: GT17061

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17061

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3243078 [Map]; Strand: w
      • AT5G10310.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -812; Region: promoter
    Flanking Genome Sequence: GT17061 - 3-prime edge 
    AGTTACCTTA ATTGAATGCA GTCCTAATTA TAAAAAAAAT GTGTCCTCCT 
    TCTTCCTTGC TCTTCATTTA TTGCTCTTGG TAAATTTTTT ACCTCTTTTC 
    TCATTTTGTT CAAAAGACAA ATCTCAGTCA AACTTGTGGT TTTTACTACA 
    CACACTATTA CTTGCTCAGT AATTTCCCTA TTCTGATGAA AAAAGGAAAC 
    CCCAAATTTC CCTATTCGTT TACTATTTTC TGATGATAAA AGGAAACCCC 
    CATTTGATGT GTCAGTAAAT AGATACTTAC CAGTGAAATG TAATTCCACT 
    CTTCCTTTTT TTTTTTAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 880653 [Map]; Strand: c
      • AT2G03010.1 - [+] show detail - Family of unknown function (DUF577)
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: GT17061 - 5-prime edge 
    CTTTCTCCCT GCTCTGGAAC TCTTTCTCAC TTGTTTCACT CCTCTCTCAA 
    CAATTACATT GCCTTTGATT GCATACAGTC TCCAAAGCAA TGAATTTGTA 
    TTGGCTAGTA CTGTATCATT CCAGTTGTTT CCACATCTCT GAAACCTCTC 
    CTCACAAGAC CAACTTCCAT TTCTCTTTCC ACAAGCTCTC TTATAGAATC 
    TATCATCTTA TGTGCAACGG ATTCAGCTTT ACTTGACTTC TCTATCAATT 
    GTGAATTGCT AAACAAAAGC CACCCATAAA CGCCAAGACC CAGCTACTGT 
    TATCTCTTGG TGGGTCTAGC CTTGTGGTTA TCTCTAGGAA AAGATTCTCC 
    ATCACAGGAA TCACAAAATC GTCATCAATA AGCGCCATTC TTAAGCACTG 
    GAAGATATAA ACCGCTCTAT GAAACTCTGT TTTACTCGAT GCAATATAAT 
    CTCGTAGCTC GTTCAAACTC TTCTCTACCA TTCTTAAGAT CATCATGTGG 
    TTCGTAATCA ACATTTTGGC ATTCCTCACA ATCTCCTTGG CCTCTGTTCC 
    GACTACTCCT TCGATCTCGT TCATGGAAGC CAACACAAAA TGGCATTGAT 
    CTTTAGTGTA ATGATAC

AT2G03010.1

Model type
Protein coding
Short Description
Family of unknown function (DUF577)
Computational Description
Family of unknown function (DUF577); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF577 (InterPro:IPR007598); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF577) (TAIR:AT5G37410.1); Has 114 Blast hits to 63 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10310.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR