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GT17080

CSHL Arabidopsis genetrap mutant lines

Original: GT17080

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17080

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3243318 [Map]; Strand: c
      • AT5G10310.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1052; Region: intergenic
      • AT5G10320.1 - [+] show detail - unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; ...
        Distance: 638; Region: intergenic
    Flanking Genome Sequence: GT17080 - 3-prime edge 
    GTAGAGGTTT TTACCGACCG TTACTTACCG TTTTCATCCC TACGTATATC 
    AAGTACCTTA TGTGACATTT TTATCATTTT TAGAAAAAAT TAGTTCTTCT 
    TAAAGTAATG ATTCTTTTCT TTTTCTTTTT GGTTTGAATC AAAAGTACAG 
    TACAAGTAAC CACTCGAATG ATTACTCTTT TTTTACATAT TAGCTGAGTT 
    TTCAATCGAC ATGATAATTA AATTGGAGTA GGATTTTGGA ATGGTCCATG 
    GACCAGTGAT GATCATTAAC TATTGTTCAC ACCAAATTTT AAAAGGAGAA 
    TTTCGAATAT TAAGTGTAAA ACTTTCTTGC ATCGAATAAA TACTATTTAT 
    TTGAAATAAA TGCGTAAATT TAAACAAGTG AGAAATTAAA AGAAGCCACA 
    AAATGTTTTT TTTTCCTCAG GGAGAACAGA GAATATACCT AAACCCGTGA 
    AAACATCCTT TATTATTTTG AAAAATCAAA TTGAAAGGAG TTTGGAAAAT 
    AACAATACAC GAAATAAAAG CCGTGAAACT AACGTTCCGT GGAATCGCGT 
    GATACGATCA GTGACTATCT TTTTCCACGT TACCTGATTT GTCGCATTTC 
    AAAATTTGTC TTACAACATT ATTCGAAAAC TAAAGAAATA AACATGAAGT 
    CACAAACAAA AAAAATAAAA TCATCAGAAA GAGAAGACTT TCACAGTAAG 
    ACAACTGAAA TTATTATTCC ATGATCCAAT TATAAGAGTC AATGGCTTTT 
    GTCTCCTTTG AACATCATAG GTCACAAAGT CTTCAAACTA TTTTTTCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 3243217 [Map]; Strand: c
      • AT5G10310.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -951; Region: promoter
    Flanking Genome Sequence: GT17080 - 5-prime edge 
    TACTTTCTCC CTGGATATAC GAATAGTAAA TGTACAGTTT ATGGAGTAGA 
    AAACGATACT GCGAAAAATT GTTGGAAAAC AGCAGCAGAA AGAGACATGG 
    ACTATTATTA TAATATTAAG GGGACAGATG TTCACATTTA ATAACATAAG 
    ATTGTTGAAG TTACCTTAAT TGAATGCAGT CAAAATTATA AAAAAAATGT 
    GTCATCCTTC TTCTTGCTCT TCATTTATTG CTCTTGGTAA ATTTTTTACC 
    TCTTTTCTCA TTTTGTTCAA AAGACAAATC TCAGTCAAAC TTGTGGTTTT 
    TACTACACAC ACTATTACTT GCTCAGTAAT TTCCCTATTC TGATGAAAAA 
    AGGAAACCCC AAATTTCCCT ATTCGTTTAC TATTTTCTGA TGATAAAAGG 
    AAACCCCAAT TTGATGTGTC AGTAAATAGA TACTTACCAG TGAAATGTAA 
    TTCAACTCTT CCTTTTTTTT TTTAACCGTG AAAAATTCCT TTCACCGTTT 
    AAATTGTTGA AAAA

AT5G10310.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G10320.1

Model type
Protein coding
Computational Description
unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR