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Mutant Lines
GT17128

GT17128

CSHL Arabidopsis genetrap mutant lines

Original: GT17128

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17128

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2929036 [Map]; Strand: c
- AT3G09540.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: exon5 (3UTR)

CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTTTG 
GTAGTGCCAA AAGTGATCCA ATCAATTCAC TTCGCTAAGC AATAGTTATG 
CGGTGGTCGC AGGCCGGTCT AGTGGGAGGG GAAGGTTCTG CCAGCCGGTC 
GAGTGTTTCA GATAGTTCTT GAGTATATCG GTTGGAGATT CGACGGTCCA 
TTCAGAATAG TGTTGGATTG GAGAGAACAC ATAGCGCTCT CCGCCCTGAC 
TAAGACACGA TTTGGCTCCG TTCAACAACA AATCCCCTTC TGATCTTACG 
AATCCAGCTC CGGGTTTCTC TTTATCAGCG GCCTAAACAC CAAACACAAA 
AAAACGTAAT GTTAACTATA ACATTATAAA GAAAATGATT TAAGAACCTC 
AAGAACGTAC AAAGGATATT ACGTACCTTC TCAGTGATGT ACTTAAAGAC 
AGTTTTC

5 prime edge [+] show sequence

Chromosome: 3; Position: 2928946 [Map]; Strand: c
- AT3G09540.1 - [+] show detail - Pectin lyase-like superfamily protein
  Distance: 0; Region: exon5 (3UTR)

TAGTTTCTTC CATTTCCACT TAGACAAACA AAATGATATA TCAAATTTGA 
TAGGATTGTC GAATTTTTCC AATTCAAAGT TGAGATATTA GTTTCAACTA 
ATAAATATAG AAAGAGAAAA AAAGATTTGT GTTATTGTGT ATTTTGAGCT 
TGTTTGTTGT ATGTATGAAT TATCTCCATT AGATGAATAA CAAGTCTGTG 
GTGGTTGGCT CGGTGACTCG GTCCCTCTAA AAAGGTTGAA AATTGTATAT 
CACTAGTAAG TTTGATTCGT GTGGAAGGGA TGATTTAATT TAGTCCCTCT 
AAGAAGATCG AGTATCATCA AAAGCATTTA GGACTCAAAT CCGAAACTTC 
GTGTAAATAT GAATTAACAT GTACACTAAT TTTATGTAAC ATATCAAATA 
TTCTTTTTAT GCAATTTTAA GGTTTTGAGT TATCTATTAT TTGTCATGAT 
TCTACAAAAT GTGTGGCTCT TCGGTTCTGT CAATGTCATC TTCCGTTGAA 
TATTAGTTGT ACAAAAGTAT TTGTGGTATT TAATTAGGAT TCTACAAATC 
TTGTAATGTG ACTTGACTTG GATTATTCGC TACCTAACGG TCCTCACCCA 
CCAAAAAAGG ACCAAAGATT CTCTACATAC ACATATATGA TGATGATCGT 
AGTTATATTT CACATGATGG ATTAAATGTT TAGTCACAAT ACCT

AT3G09540.1

Model type: Protein coding
Short Description: Pectin lyase-like superfamily protein
Computational Description: Pectin lyase-like superfamily protein; FUNCTIONS IN: lyase activity, pectate lyase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), AmbAllergen (InterPro:IPR018082), Pectate lyase/Amb allergen (InterPro:IPR002022), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G55140.1); Has 1920 Blast hits to 1910 proteins in 308 species: Archae - 2; Bacteria - 1025; Metazoa - 0; Fungi - 186; Plants - 681; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR