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Mutant Lines
GT17133

GT17133

CSHL Arabidopsis genetrap mutant lines

Original: GT17133

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17133

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 45216 [Map]; Strand: c
- AT5G01110.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -841; Region: promoter
- AT5G01120.1 - [+] show detail - Protein of unknown function (DUF674)
  Distance: 0; Region: intron1 (5UTR)

AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGA 
CTGTATGTGT AAAACCTTGA CCCTTTTACT TTAACTCTTG TATGAAATGC 
GGATTTTGAA TCGAAAGATG TCAGACGATT TCGAGAATTC GGTGATAAAC 
TTGAAGCTGC TCATAGATGA AGAGAAAAAC AAAGTTGTAT TCGCTGAGGC 
GGGTACAGAT TTTGTCGATA TACTCTTTAG CTTTTCGACT TTGCCTATGG 
GAACAATTGT TAGATTGCTG GAGATGCATC ACAAGTCACG CTCAATAGCC 
ATTGGTTGTT TCAACAACAT CTATGCAAGT GTTGTGAGTA TGGGAATGAA 
GCATTTCAGT ACTCAAGCTT GCAAGCAAAT GCTTTTGTTT CCTGGGAGTT 
TGAATCAGGA CAAATGTCAA AATATGAAGC TGAAGATAGA TGATTCCGAG 
GCTACCAAGT GTTTCATGTG TCCTATGTTT GTGCGAAGCG GACAATGCAG 
CAAAGGCTAT AGCAATTTTA AGACCTCTAG GTGTAGCTGT GGGAATTTCA 
TGGATGAGGT GATTCAGTTT CAAGGAGAAG GTGGCCGAGG AAATGGTTCT 
CAAGCTGAAG TATTTGTGAG GGGTGCTCAT ACTTCATTCT AAATTCACTG 
ATGATTTGAA AGTGCAAGTT AACTCTGTTG GGTCAACGCT TAATGTTCTT 
AAAGATCTTG CCTATGCAGA TTGCGATAAG TTGGTTGAAT GATTCTTGAG 
GTGATCT

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 44751 [Map]; Strand: c
  - AT5G01110.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -376; Region: promoter
  - AT5G01120.1 - [+] show detail - Protein of unknown function (DUF674)
    Distance: -62; Region: promoter
Flanking Genome Sequence: GT17133 - 5-prime edge
```
AGTGAACGTC GAGGAAGAGG AACAGTTGAG ATAAGCGGGA AACTATATAC 
AACGTTTTCT TCTTCTTTTT TTAATTAAAT GCGATAATTA AATATAGAAA 
TGATTTAACT TTAAACCATT AAACCATTAA CACTACTTTA GTAGATTCGG 
TTTTTTCATA ACTTACATTT GTAGATTTTG TAGAATTTTC CATGCATCAA 
ACATAGTATT TTATAGGATT ATGATTGCAA TATTTAATTT TGTATAAATG 
TTTTGCAAAA CAGTAAACAT CCCTACACTA TTCG
```

AT5G01110.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G01120.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF674)
Computational Description: Protein of unknown function (DUF674); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF674 (InterPro:IPR007750); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF674) (TAIR:AT5G43240.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR