1. Home
  2. Mutant Lines
  3. GT17152

GT17152

CSHL Arabidopsis genetrap mutant lines

Original: GT17152

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17152

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22877500 [Map]; Strand: w
      • AT3G61800.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR...
        Distance: -654; Region: promoter
      • AT3G61810.1 - [+] show detail - Glycosyl hydrolase family 17 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT17152 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTTCCGATC 
    ACTGGACCTG GAAAAACAAA CAAAAAAAAG TCATTGAGAG TTAAAAAGAT 
    TCGATGTTCT CGTGAATCAC ACAATGGAAT CGAAGATTAC TACTATCTTC 
    AAGATTGGAG CTGTATTCTC CGTAGTTGAT TCCGATTTGT GGACCTGGAA 
    AACGAACGAG AAAGTGAAGG AAAATGAGAG AAAAAGAATC AATTTTTTCT 
    CGGGAAAAGT ATAACAGAAT CACCAGATTA TTTACCTACA AGCGATGGAA 
    TCGTGGAGCA AGAAGCCATT GAGATGGAAA AAACCAAGAG AATCCAGAAA 
    GCGTTTTGCA TCGTCGTCAT CAGGATCATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22877625 [Map]; Strand: w
      • AT3G61800.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR...
        Distance: -779; Region: promoter
      • AT3G61810.1 - [+] show detail - Glycosyl hydrolase family 17 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT17152 - 5-prime edge 
    AATACCATCG CTAGTCAACT CTCTCTCCAT CAAACATGTC AAAACCTTTG 
    ACTTGGATCC AAGAATCACC AAATCTTTCG CCAACACTGG AATCACTCTC 
    TCCCTCTGTA TCCCCAACGA CAAGATCCCA TCTCTAGCCA CCAATCTCTC 
    CGAAGCTGAA TCAATCATCA GAAACTTCAT CTCTCTCGA

AT3G61800.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2043 (InterPro:IPR018610), ENTH/VHS (InterPro:IPR008942); Has 308 Blast hits to 279 proteins in 95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi - 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61810.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family 17 protein
Computational Description
Glycosyl hydrolase family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G29360.1); Has 2169 Blast hits to 2156 proteins in 157 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 56; Plants - 2095; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR