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GT17154

CSHL Arabidopsis genetrap mutant lines

Original: GT17154

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17154

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 127337 [Map]; Strand: w
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17154 - 3-prime edge 
    TGATTTTTCT CGGGAATAAC AAAACTAACC TGATGGAATC CAACTTCTTT 
    AGGGAGAGGA ACACCAAGCT CAGCCATACA AGCATGAATC CGATCATCGG 
    ATCCGTACAA ATCGGAGTAT CTCTCGATAC ACCGATCTTG CATCTTCTCC 
    AAAACCTTGG CTAATGGATA ACTTATAGCA AACCCTCCTC CACCGTACGC 
    CATTCCATAA GAAAACTGAT GAAGATTCTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 127445 [Map]; Strand: w
      • AT4G00300.1 - [+] show detail - fringe-related protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT17154 - 5-prime edge 
    TTCCATCCTA CTTTCTCCCT GGAAAAAACA AAGTAAATGT GAAATAGTAA 
    AACTTAAAAT CCGTGATTAG ATTCATTTGT CATTGACTCT TGTTACTTCA 
    CTTACTGATT ATTAATTTTA TGGTATGGTT TATAACAGTT TGATGTATAC 
    GGGAATCTCT TAGGGCTATT ATCTGTCCAT CCACAAGCAC CAATAGTATC 
    AATCCATCAC CTAGACGTAG TGGATCCTAT ATTCCCAAAA ACAAACCGAG 
    TCAACGCATT AAAGAAGCTA ATGATCCCAG CGAAACTCGA TTCAGCGAGT 
    CTTGTCCAAC AATCGGTATG CTATGATAAG AGTCATCAGT GGACAATGTC 
    AATCTCGTGG GGATACACAG TTCAAATCAC GCGTACGTAT ATGCCAGCAA 
    GGATGATGGA AGTGCCTACT CGCACTTTTA ATGATTGGCA CTTACGTAGC 
    GATTTCACTA ATCTTGCATT CAACACACGT CCGGTAACAT GGACGGATTG 
    TCAGCGTCCT CGTGTGTTTT ATTTCTCTCA TGCGTTTAGT AACTCTTCT

AT4G00300.1

Model type
Protein coding
Short Description
fringe-related protein
Computational Description
fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link
InterPro Scan - TAIR