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GT17163

CSHL Arabidopsis genetrap mutant lines

Original: GT17163

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17163

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17235127 [Map]; Strand: w
      • AT2G41360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17163 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATT 
    TGCCACACAC ATGCACGAAA CCCACCTATC ATCAATTGGC AACTCCAGTT 
    TCTCCTTTCT TGTACCTTGT CTCAGATTGT AGACACTGAT ACTTCCAAAA 
    TCCTTAGCAT AAACCTTCCC CTCCAATGAC ACACTTGACA CCATATTCGG 
    TCTACTATCC GCTTTCTCGT CAGGGACAGG GACTCCCACG ACTTTCCAAG 
    TTTGCGTTTC TAGGTCGTAA ACCTGTTCTT CTGACTCAAC TAGTTTCAAG 
    TCTTGGATCA CATGTATCTT TCCGTCGAAT ACTCCCACGG CGCTGCTCGA 
    CGCAATTCGT TGGAACTCCG GCTTGATCGG GCCCTGACGT AACTTGCCAG 
    ACCGGGTATC AAGGATCCAC AACTCGGTCG GGTTTGGACG TCCGCCCACA 
    AAGTATATCT CTGAATCCAC CGCGACGGTG GAAGCTCGGA ACATGAAATT 
    ATGACTAGGG AACGAGAGCG GG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17235205 [Map]; Strand: w
      • AT2G41360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17163 - 5-prime edge 
    ATGTGCTCTT TGCTTTTTTT ACCAAATATG GGCTACTGTG GCTTGACACA 
    AAGCTTAACA ACGTATGGAG AGTGGTTAAG GGTGATGTGC AGACACTGCA 
    TCGAAAGTTG TATGGCTCTG CAATGGCGGA ATATTATGGG AAGCTAGCTA 
    TTTTCTGGAG AGAAAGATAC ATTAGTACTA GTATTAATAC TACAAAGAAT 
    AATAATAATA ATAACAAGAA GAAGGAAGAG AAGATTTGGT CTGCATTGAT 
    CGCGTTGAAT AGGGTTGGAG ATGGAATTTG CGGGACGATT GAATGGTCTG 
    GTGTCGTTGC CACCATCCCA TATATTTGTC AGTTCTTGCA TTGTTTAGTT 
    GCTTCAGATT AATAATTTGG CCCTCAAGTT TGTCCGATGA AATTGCGTAT 
    TAGAAAGGCT TTGTATCATT AAGAGGCTTT TATCTTTCTT TTCTTTTTTT

AT2G41360.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G44630.1); Has 607 Blast hits to 599 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 603; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR