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GT17167

CSHL Arabidopsis genetrap mutant lines

Original: GT17167

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT17167

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493708 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT17167 - 5-prime edge 
    TCATCCACTT TCTCCCTGCC AGGGTTGACC TTATTGAGGA CTTTACAAAG 
    GATAATTCCA CTTCTTAAAC CAAGCCTAAG CCCTTCTTCT GTTGGCTCTG 
    CAGGCAAATC CTTAGCTCCA ACAACTACAA CCATCCTTCT CAGCCAATTA 
    GCCGCCTCAT ATCTCCTCGA TGCTACGCAA ATGCAGATAA ACCATAAGCT 
    CTTTCTCTAC AATTTAACAA AACTATCAAA AGCTAAAAGC TAGTAATCAC 
    TCTAAGGAAG AAGAGAGCTA TTCAATTTTC ACAATAAATT TTGAAACCCA 
    GAACAACAAT TTTAATCAGA TCAAACATTC TGTGTTATAG ATCATGGATG 
    CTCAACTATC AGCTATACAC AATTCACGAA AAAAAAATAA AAGGAATAGA 
    GACCA

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR