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GT17168

CSHL Arabidopsis genetrap mutant lines

Original: GT17168

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17168

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 649971 [Map]; Strand: w
      • AT4G01515.1 - [+] show detail - transposable element gene
        Distance: -177; Region: promoter
    Flanking Genome Sequence: GT17168 - 5-prime edge 
    GCAAGGATGG GCGGGGGCGG AGCTAAATGG AGGGCAAGGT GGTCAAAGGA 
    CCCCATAACT TTTATAATTC AAGCTTATTT AGTTAGAAAT TTGAATTATT 
    TGGCTTAAAT ATGTAATATG ACCCTATGTT CCTAGTTCAT ATTTTTCATT 
    TGCACCCCCT AATCAATTTT TTTGACTAAT CTTTTCTTGT TATAATACAT 
    ACTATTTAAC TTTTGATCAT ATTTTATATA GGTTTTCAAC TTTTCTTCTT 
    TACTTAGGTA TAATTTTTTC TTC

AT4G01515.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-18 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)
Link
InterPro Scan - TAIR