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GT17201

CSHL Arabidopsis genetrap mutant lines

Original: GT17201

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17201

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 572143 [Map]; Strand: w
      • AT4G01390.1 - [+] show detail - TRAF-like family protein
        Distance: -548; Region: promoter
    Flanking Genome Sequence: GT17201 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATA TTTTAAGCAG 
    TAAGAGCAAG ACAGTCACAA TTACAAATAT CACAACTATA CTAGTAGTAA 
    CAAGGCTATA GTTATGTTTA TAAAGTTAAT TTAATTCTCT TATGAAAATT 
    AGCCTTTGGA TATAGCATTT TTTTGGTTTT AGTTATTTTA ATATACATAT 
    ATGTCTATGT TTCTAGATAA GGACCCGTTC TATATTTCTA GATATCAATT 
    TAATTATAAC GTAGTAATGT GAAAAGAATA ACAATAATAA AATTAAAGTA 
    TTTCTCTGAG TTGAGAATTT AGGTCGATTT TTACGAACAT ATGCCCAAAT 
    GTGACGTATA AATAAAAGCG TATCAATATT GATGCTTTGT TCAATTACCA 
    AAAACAAAAA AAAAAATTTT TTGGCCAATC CAAAAAATGT GGGGGGCAA

AT4G01390.1

Model type
Protein coding
Short Description
TRAF-like family protein
Computational Description
TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT4G00780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR