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GT17239

CSHL Arabidopsis genetrap mutant lines

Original: GT17239

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17239

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58716 [Map]; Strand: w
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17239 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAATTCT 
    CCAACATCTC CCACCTTCCA CGACTCTGAC TACTCATCAC CCGGTTTCGG
    AGTCGTCGAC ACCGGCTTCG GTTTAGACTA CCACTCTGTT CCGCCGTCAC
    ATGTTTCCGG TCTTCTGATC AACCAAAGTC AAACCCACTA CACACAGAAT
    CCTGCGGCTA TCTTCTACGG CCACCACCAC CATACACCTC CGCCGGCAAA
    GCGGCTCAAC CCTGGTCCCG TGGGGATAAC AGAGCAGCTG GTTAAGGCAG
    CAGAGGTCAT AGAGAGCGAC ACGTGTCTAG CTCAGGGGAT ATTGGCGCGG
    CTCAATCAAC AGCTCTCTTC TCCCGTCGGG AAGCCATTAG AAAGAGCAGC
    TTTTTACTTC AAAGAAGCTC TCAATAATCT CCTTCACAAC GTCTCCCAAA
    CCCTAAACCC TTATTCCCTC ATCTTCAAGA TCGCTGCTTA CAAATCCTTC
    TCAGAGATCT CTCCCGTTCT TCAGTTCGCC AACTTTACCT CCAACCAAGC
    CCTCTTAGAG TCCTTCCATG GCTTCCACCG TCTCCACATC ATCGACTTCG
    ATATCGGCTA CGGTGGCCAA TGGGCTTCCC TCATGCAAGA GCTTGTTCTC
    CGCGACAACG CCGCTCCTCT CTCCCTCAAG ATCACCGTTT TCGCTTCTCC
    GGCGAACCAC GACCAGCTCG AACTTGGCTT CACTCAAGAC AACCTCAAGC
    ACTTCGCCTC TGAGATCAAC ATCTCCCTTG ACATCCAAGT TTTGAGCTT

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR