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Mutant Lines
GT17252

GT17252

CSHL Arabidopsis genetrap mutant lines

Original: GT17252

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17252

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 1856551 [Map]; Strand: w
- AT3G06130.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
  Distance: -1488; Region: intergenic
- AT3G06140.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 131; Region: intergenic

GGTAGAGGTA TTTTACCGAC CGTTACTTAC CGTTTTCATC CCTAAGTAAA 
AGAAAAGAGA GAAAAAGAGG AGAAGTTGAA GAAGAAGAAG AATCATTTTT 
CTGCCTTTTT GCCTATTAGG CTATATAAGT TTAAAACATC AATTGAAGAA 
AAAGCTGCCC GAGGAAAAAG AATGTTTCCC ACTGAGGTTT AGCTTAAAAG 
AAACCACAAA AGGTCCTTTT AAAATTAAAA ATTCGATTTT TTTTCTTTTG 
ACAGAATGGT CAAACTTTTG AGTTAAGAAA AGTCTTAATA TGATCTGTTA 
TTATGAAAAA CAGTTTTCAT GGTGGATTTT TTTTTTTTTT TTCCGGGGGG 
AAGGGGTGGG GAAAAAAATT TGGCTTTTTT GCTTAGTTTT TATGGCAAAA 
ATTCCTTTTT TTTAAAAAAT TTTTTTTTGG CCAAAAGGGA AAGGGTTTCC 
CCGGGGGCCC CAAAAAAAAA AATTTCCTTT TAAAGGGCAA AAACGAAAAA 
AAGGGCTTTT CCAAAAATTT GGAAAAAAAA ACCAACCCCA GGGGAAAAAG 
GGGGTCCCCC CCCAAAAGGT TGGGAAAA

5 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT17252 - 5-prime edge
```
TCTCTCAAAA GATTCCAAAA CTCTATTTGA AAATGTA
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 15426742 [Map]; Strand: w
- AT4G31890.2 - [+] show detail - ARM repeat superfamily protein
  Distance: 0; Region: intron2 (3UTR)
- AT4G31890.1 - [+] show detail - ARM repeat superfamily protein
  Distance: 0; Region: intron2 (3UTR)

ACTTTATCCC TGTGTAGAAT GCTTCATGAA TCATGATGAC ACCTACAAGA 
CGTGATGCTT GATTATTCTA TAATGAATTT GTGTAAAATT TTCGCTACAA 
AACAAAACAA TAACAAACAA AATGTAGTTA GATCGACAGA TCCAATTTAC 
TCCACGCCGC CACATTGTTT ATTCAGGCAT GTACTCTATT TTATATTCGA 
GAAACAACCA TAAAATAATC TCTCAAAAGA TTCCAAAACT CTATTTGAAA 
ATGTATTTTA CAGAGACATA AATATAAAAT TAAATACAAA CAATAAAAGC 
AAAAGCAAGA GTGGACCAAG CCATACTTCA AAGTGAGATA ATGACCGACA 
CTTTAGTTAA GGAAGATGGG CAATATGGTA ATTTCAAGAT TCAGGCTATG 
TGGGTGGGGT CTCGAGGAAG ACTAAAAAAC TGGTGAAGTG CATGTGAGAG 
ACTAACTCAA TGCCCTCTAA TATTACCCGA ATTTACATTT TATGCCACTG 
TCAGTGAGTG AGAGACAGAG CATCAAATCA ATAAAGCCTT GGGAAGAAAG 
TTAACAAACT TATCAATGTG ACAATCTACT TAAATTAGCA ATCTGACTAA 
TGATTAAGAC TTACATTTTT CNAAAGGGAA GGCTCTTTGA AGTGGAGCTC 
AAACTTAGTG ACTTGAAATG CTCTGAAGGA ACAAAGTCTT GTGGCAAATT 
AGCTCTCTT

AT3G06130.1

Model type: Protein coding
Short Description: Heavy metal transport/detoxification superfamily protein
Computational Description: Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.1); Has 122077 Blast hits to 41053 proteins in 2213 species: Archae - 188; Bacteria - 33817; Metazoa - 49902; Fungi - 6812; Plants - 10774; Viruses - 1540; Other Eukaryotes - 19044 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G06140.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1); Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2; Bacteria - 144; Metazoa - 2405; Fungi - 531; Plants - 3352; Viruses - 272; Other Eukaryotes - 1037 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G31890.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G25130.1); Has 1876 Blast hits to 1673 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 369; Fungi - 233; Plants - 1143; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G31890.2

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G25130.1).
Link: InterPro Scan - TAIR