1. Home
  2. Mutant Lines
  3. GT17257

GT17257

CSHL Arabidopsis genetrap mutant lines

Original: GT17257

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17257

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25843372 [Map]; Strand: w
      • AT5G64660.1 - [+] show detail - CYS, MET, PRO, and GLY protein 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17257 - 3-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGCCAAA GCAATGAGGA 
    AAGATGATCT CTGCATCACT GTTCCTACCT TCTTCCGATG TCCTATATCT 
    CTCGACGTTA TGAAATCTCC GGTGAGTCTT TGCACCGGCG TTACCTACGA 
    TCGAGCTAGT ATCCAACGGT GGCTTGACGG CGGGAATAAC ACTTGTCCGG 
    CGACGATGCA GATTCTTCAG AATAAAGATT TCATACCGAA TCGGACTCTT 
    CAACGTCTTA TCGAGATTTG GTCTGATTCT GTTCGTCGTC GAACTTGTGT 
    TGAATCGGCG GAATTAGCTG CTCCGACGAG AGACGAGATC GCCGATGCGA 
    TCGATAGAGT GAAGATCGAG AAAGAAGAAA GAGATGATCG CGAGGTTTTG 
    TCGAAGATTG TTCGATTCGG GAGAGAATCT GATGATAACA GAGGATTTCT 
    CGCCGGAAAA GATGATTTCG TGATACTTCT CGTGGATCTG ATTAACCAGG 
    TGGATTTCGA AACCACCTCC GCCGCGAAAT CTCTGGTTGT TCAAGAAGCG 
    GTGAAGATTC TGAGTACGAT TCGAAGCAAA GTCTCAGATC GGAGACGGTT 
    TTCGAATCTG ATTTTAACAA CGGTCGAGAT CGGTTATCGG TGATCGTCTA 
    CTTGTTTAAA ACCGGGAATG TCGAATTGAA AATTGATTGC GCCGGTTTAC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17257 - 5-prime edge 
    TCTCGGAGTT GCTCCTGGCA AAATTCCC

AT5G64660.1

Model type
Protein coding
Short Description
CYS, MET, PRO, and GLY protein 2
Computational Description
"CYS, MET, PRO, and GLY protein 2" (CMPG2); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR