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Mutant Lines
GT17283

GT17283

CSHL Arabidopsis genetrap mutant lines

Original: GT17283

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17283

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30056773 [Map]; Strand: c
  - AT1G79910.1 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
    Distance: 0; Region: exon7 (CDS)
  - AT1G79910.2 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
    Distance: 0; Region: exon7 (CDS)
  - AT1G79915.1 - [+] show detail - Putative methyltransferase family protein
    Distance: -447; Region: promoter
Flanking Genome Sequence: GT17283 - 3-prime edge
```
AACGGTAGAG GTATTTTAAC AGAATCGCCG ACGGGCGGAA AACCAAAGCC 
GAGATCAGTG AGACGAAGAT TCGCAAACCC GCCACCTGAA GCGGAAACGG 
AAGGGGAAGC ATTGCACTTG ACAGTAGAGA GTAAGAACAT GATGAGAGCA 
TCAGAGTCGA TGGGGAAAGC AAGCGGAGAG GGTTTTAGGA GAATGAGTCG 
TCGAACAGCC TCGTGGCAGC ATAAGCCCTC CTCCTGCGTC CCCGATTTTG 
ATGAGGTCGC CGCTCGCGTC GATGCCCTCT CCCGATATTG ATTTTCTCCT 
CTGTGAATCA TCATCATTAG TCAATTAGAT ACCCCCAAAG AAAAATTGGT 
CTATTTGTTC
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 30056638 [Map]; Strand: c
- AT1G79910.1 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
  Distance: 0; Region: exon6 (CDS)
- AT1G79910.2 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
  Distance: 0; Region: exon6 (CDS)
- AT1G79915.1 - [+] show detail - Putative methyltransferase family protein
  Distance: -582; Region: promoter

CCAAATAAAA TAAAAGTAAT CTTTACTTAA AGATAGATTA CTCACCGGTG 
TCCATGAGAT GAGATGTAGT CATCTTCTCC GGAAGACTTT CCTGTTTTTC 
GATCTTGGGT TTGGTGTAAG GCGCAGGAGT CATGAATCTG TAGTAGAAAG 
GTTTCATTTC AGGATCATCC TCCGGGCCAG TCATACAACT CCCGCTTGTA 
CTCATGGAGT CTTCTTCGCT TGTACTCATT ATGGACTTGT TGCTGTCATC 
CATCGAGTCT TCTCTGCCAT GGAACGAAAG GCTGCTTCTC TTTTCCATGG 
TCTTTTCGGG TTCGTCGTTG GTCTTCTCTG TTTTTGGTTC TTCAGTTTCC 
GTCTGCTTAT GAATGAGAGA GTCTGGCTCA AATCAAATGG AATGATGTAT 
TTAAAGCAGA CAAAGAAGAC GACTCACATG GACATGATGA TGATGAGGTG 
GTGTGTACAA TCTCTGCTCT AAAGACTTGG CATCCCATTT TATGGAGTAC 
TCTCTGGCGA TTTCCTGCAG CAGCT

AT1G79910.1

Model type: Protein coding
Short Description: Regulator of Vps4 activity in the MVB pathway protein
Computational Description: Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G32350.1); Has 592 Blast hits to 592 proteins in 162 species: Archae - 0; Bacteria - 3; Metazoa - 147; Fungi - 112; Plants - 281; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79910.2

Model type: Protein coding
Short Description: Regulator of Vps4 activity in the MVB pathway protein
Computational Description: Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G52315.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G79915.1

Model type: Protein coding
Short Description: Putative methyltransferase family protein
Computational Description: Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link: InterPro Scan - TAIR