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GT17299

CSHL Arabidopsis genetrap mutant lines

Original: GT17299

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17299

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21602130 [Map]; Strand: c
      • AT3G58390.1 - [+] show detail - Eukaryotic release factor 1 (eRF1) family protein
        Distance: -913; Region: promoter
    Flanking Genome Sequence: GT17299 - 3-prime edge 
    CGGTAGATTG TATGAAATTA AAAGCGGATA CTTATTATGT TGATAAGGTT 
    AATATAAAAA TAGACATAAA AAGAGAAAAA TGGCAGGAGA AACATAATGG 
    TTTAGCACAA TCGAAAATAG AGTACTACTC TGTATCTCAC TTGATCCTTC 
    ACTTTCACTC CATCTCCTTT TCTCAAAGCC TTCCTCATGT TTTTGCAGCA 
    CCACTATTCA AGCCTTAAAT CTCATGACGG TAGAGAAAAA TGGAAGTCAT 
    GATCCAAGCT TAGTGATTTC CCACTTACGC AACAAAAGAG CCATGTTTTT 
    GGATATGAGA GCGAGAATGT GAGATTACTC AAGAAACTTA AAATATTTGC 
    CCACTTGTTA AATGGGGATT AGTCTTGTCA CTCTCAAAAC ACATTACTTT 
    AACAGCAAGA AACTCAATAT TTTCTAGAAG AAACCTAGAA CTTCCTCTTG 
    AAAACATTGT TGAAAATTTC CAAGATATGT CTCTTTTATC TTCCTTAAGT 
    TTTAAGAAGA CTATCATTAC AAACCTATAA ACGAACAGAC C

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21601953 [Map]; Strand: c
      • AT3G58390.1 - [+] show detail - Eukaryotic release factor 1 (eRF1) family protein
        Distance: -736; Region: promoter
    Flanking Genome Sequence: GT17299 - 5-prime edge 
    CTTCCATGAT TTCGAAAGAT ATCCTAAGAA CAACAAGAAG TGAGCAAAAT 
    AGTAAGAACA ACATGTGAGC AGCACGTGAT TTTGATTAAT TTACGTCAAA 
    AATTAAGAAA AGGAAATTAG ACCATCTTTA TCAATCGACT CTTACATAGA 
    ATTATAAACA ATTTTGATAT ATACAAAATA ATGTTTAAAT ATTAAAAAGG 
    CTAGAGAGAA TGTATCTAAA AACTTTTAGC TAAGAGCCAT TTTTCATCTC 
    TTAAGTATAC TTTTTTTTAA TTTTTTTATT CTTATTTTGT TTAATATAAT 
    ATTTTAATAG TTCTTATGAT ATTGTTAACA ACCTATGGAT AAGGATGCTC 
    TAATGAAATA AAGAAACTAT GTAGAATTAG ATATTGCACT AACTTGATTT 
    TATTGATTCA CAAAGTATAA TATTTATACA AGAGAGACAT CGTATAAGAT 
    ATACTCTAGT CCCTAAAATA TAGGACATAA TCAGAAGATA TATAGGAATA 
    ATCCTAATGA GATTAATCTC TATCCCCAAT ACTTAACAAT GTAGAAAAGG 
    AAAATACGTT TCCTAGTTTT CCTAGACGAC TTATGTAAGC TTTATAGCTA 
    GCTATAAATA TGTATATCTC AGGAGATCAA GTCTATTTCT TCAGATCAAT 
    AACAGCTTAA TTTAAGCAAA AGTTTACTTT AAGTTTTTAT TTTTTCTTCT 
    CT

AT3G58390.1

Model type
Protein coding
Short Description
Eukaryotic release factor 1 (eRF1) family protein
Computational Description
Eukaryotic release factor 1 (eRF1) family protein; FUNCTIONS IN: translation release factor activity; INVOLVED IN: translational termination, translation; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: eRF1 domain 2 (InterPro:IPR005141), eRF1 domain 3 (InterPro:IPR005142), eRF1 domain 1 (InterPro:IPR005140), Probable translation factor pelota (InterPro:IPR004405); BEST Arabidopsis thaliana protein match is: Eukaryotic release factor 1 (eRF1) family protein (TAIR:AT4G27650.1); Has 768 Blast hits to 765 proteins in 318 species: Archae - 259; Bacteria - 0; Metazoa - 140; Fungi - 157; Plants - 51; Viruses - 1; Other Eukaryotes - 160 (source: NCBI BLink).
Link
InterPro Scan - TAIR