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GT17301

CSHL Arabidopsis genetrap mutant lines

Original: GT17301

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17301

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2758242 [Map]; Strand: w
      • AT3G09032.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -145; Region: promoter
      • AT3G09035.1 - [+] show detail - Concanavalin A-like lectin family protein
        Distance: -578; Region: promoter
    Flanking Genome Sequence: GT17301 - 5-prime edge 
    CCTACTATTT AAGACATTGG GGTGAAATTG TAAAGATATA AATATGGTGG 
    GGTCAGTTTA ACAACCTTAC TAAAAATTGA AACTTGTAAC TCACAATTTT 
    CTACTTTCTA ATTGTATAAT GTGGATTTAG TGTGAGAGTG GTTATATGGA 
    AATATTTATC TTATCTTTTC TACAGTTTTT CCTTATCTAT AAGAGCTACC 
    TACTACTACA TGTGTGTATT AATGAAAAAA TAAGAGCAAC TTAAACAAAA 
    TCTCGTACAG AGCAACTTAA ACAAATGCTG ATCATGATCA TGGGGATGAG 
    TACTGGCTCG TCAAGGGTAT TGTTCGCTCG TGGAATGAGT CATAAGTTTT 
    TGCTCATCTT CTTAATGAAA AAATAGAATA AACACACATT TTGTTATACT 
    ACTAGGCTTT TCCTAAACCC ATTTCAAACT CTTTAAGGTA AGTTTATTAA 
    CCAAATTATG ATCCGTCACT CTAACATTAA ATGGAAGTTT GTTAACCAAA 
    AAAAAAAAAA GGTGGTTTCC CTTAGGCCCT TTTTAAAATT TAAACCACCG 
    ATCCTCCCTT AAAATTGGAA AAAATTTTAC CCAATTCCAA CC

AT3G09032.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G09035.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin family protein
Computational Description
Concanavalin A-like lectin family protein; FUNCTIONS IN: carbohydrate binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin family protein (TAIR:AT3G09190.1); Has 816 Blast hits to 814 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 813; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR