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GT17333

CSHL Arabidopsis genetrap mutant lines

Original: GT17333

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17333

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23168285 [Map]; Strand: c
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: -851; Region: promoter
    Flanking Genome Sequence: GT17333 - 3-prime edge 
    CAACATAGAT TCGTCTATGG TTCATTCATC GTGTTTAAGA GTTGAAATAA 
    ATAAATTCGC CCATCGTGAA TAATAGTAGA TATTTATTCA CCTCAAACTT 
    ATAACTCAAA TATCTTTCAA CTATATATCG CCGATCAAAT TAAGCTATCA 
    AATAGTATAG CTTTTGGTTA ATGAAGAATT TTTATACTTT TGATCCATAA 
    TTCTTCTTTT TTTTGATGTC CGGATACATG AAATTGATGA TACACATTTA 
    AAACAACAAT TCGAATCAGG GAACAAATTA CAGCCACAAC CAGTGATGAT 
    AGACCATATA TATGATTTAG TTTCTTTAAT AAATAATGTG TAAGCAAATT 
    TGGCTTTGCT GTAAAAAAAG AACAAGAATT TTGGCAAAAG TTTCTGTTAG 
    GAATCTGGTT CTATTCTCCT CTTCTTCAAC CTCCAGTCTC TCATGAATCT 
    GGTTCGAATT TCTTTTTCTT TGTTTCTATA TAATTTAGAT GCATGGTTCT 
    ATAATTCTAT CTTATGTCTA TTTTGGATAT AGTATTTTTC TCAAAAAAAA 
    CAAAATTAAG AAATCTTTGA GGTCTATTCT ATGTTAATGA TAATCATTAG 
    CTTTTGTCAA CTATGTTTTT TTTTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23167966 [Map]; Strand: c
      • AT1G62560.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 3
        Distance: 5317; Region: intergenic
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: -1170; Region: intergenic
    Flanking Genome Sequence: GT17333 - 5-prime edge 
    AATAAACGTA CGGTTATATA TTTACCATGC TTATAATTAA AAGGTTTTGT 
    TTTCAAATTT CAATATAGGA GATTATAACG AATAATTTAA CGGTAATATT 
    AAAATGTACA ATTAATTACG TATCTATTTT TATCTCCTTT TATATTTTAA 
    GTGACAAAAT AAAATAGTCT GTATAGTGCA CAATTTCAGA TTACATTTTG 
    ATCGGACCAA AAAACTTCCT CCCCAAAGGC CGACATGTGT CACTGCGGAA 
    TAATCTAAGA TTCTCGTTAA CTTTCGGCCG TCCACGTGTA TGTCGTAAGA 
    TGGGTAACTT TGACCTTAAA TTTCTCCTTC TCTTCTCAGC TTACTACTCC 
    ATCTATGTAG ATGACATAGA TAAAAGGCAA TAAAGCTACA GATAACGATG 
    TGACAAATTT ATAAATTTTA GATTTGGTTA GTTATGTCAG TGTAAGTACA 
    TTTTGTTTTT TGAGTTCAAT TTTTTCTTCA TAAAACTTCA CCCTTTAATA 
    TGCTTGAATT TGACTGATTT AAACATAAAT GATCTATTAC ATCTGATTTT 
    TTGTCAGATA AATATTGTTT TCATTGATTT ATTGCTTAAG AATAGACAAA 
    TGTCTTTACA CTTTAGCATA CTGGCTTTAG CGAATTAGCA TGCACATGTG 
    T

AT1G62560.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 3
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 3 (FMO GS-OX3); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 15604 Blast hits to 15117 proteins in 1989 species: Archae - 85; Bacteria - 8709; Metazoa - 1148; Fungi - 1456; Plants - 809; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62570.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 4
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 4 (FMO GS-OX4); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 12978 Blast hits to 12465 proteins in 1535 species: Archae - 27; Bacteria - 6311; Metazoa - 1188; Fungi - 1455; Plants - 842; Viruses - 0; Other Eukaryotes - 3155 (source: NCBI BLink).
Link
InterPro Scan - TAIR