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GT17334

CSHL Arabidopsis genetrap mutant lines

Original: GT17334

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17334

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25787982 [Map]; Strand: c
      • AT5G64520.3 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: -52; Region: promoter
      • AT5G64520.1 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: -87; Region: promoter
      • AT5G64520.2 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: -87; Region: promoter
    Flanking Genome Sequence: GT17334 - 5-prime edge
    TGCCCCGGTG TCACTCTTCC GACGTGAAAG TCTCGGCGAC TAGCCGGAGA 
    TAATGGTGAA TTAAGTATGG GCTTACAAGA GGAATGCCTT ACTAATGGGC
    CTTAACTAAG TTATAATTTA GGCCCAATAT TATATATTAA ATGTGGGCTT
    GCAAATTTCC CTTCGTTTTA TTTAAACAAA AATTTAAAAA TTTAACACTT
    ATCCAAAAAA AAACTTTAAT GTAATACAAA AAATATAAGT TTAAAAACAT
    TTTTTAATAA AAGAAAAAAC AAGTGTTAAA AATCTAAATT AAATGTAAAC
    CATATTGAAC CTAGAACACC TCTTAGGGGT TTGGATGATG TATCCAATTA
    GTTTACACCA AATTTAAAAA TTTAACACTT GTCCAAAAAA AACTTTAAAG
    TTTTAATAGT AATATAAAAC TATAAGTTTG GAGATATTTT TGAATAAAAG
    AAAAATAAAT GTTAAAAATT TGTATAATCC TCAAAGAAAT AGTTTGAATA
    GTAAAAAAGT TTTAGTTAAA ATATAAAGAA GAAAGAATCC TTAAAATGAA
    AATTAAGATG AGATAGAAAT TGACCTGACT AATAAATTGG ATGGACTTTG
    ATGGGTTTTG CAGTTCTTTA TGGGCTGAAT TTTCTTT

AT5G64520.1

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 216 Blast hits to 214 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64520.2

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 215 Blast hits to 213 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64520.3

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR