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GT17344

CSHL Arabidopsis genetrap mutant lines

Original: GT17344

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17344

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17579837 [Map]; Strand: w
      • AT4G37390.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17344 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGG TACCGATCGG TATCATCCTT 
    ACTCTTGAAC AGAGTCAGGG TTCCGAGTCA TTTCTTCAAT GAACTTGAGA 
    GCTTTCACAT CTTTCTCAGA AGTCGTCGCC GAAACCATCC GAGATTGAAG 
    AGGTGAATCA ACGGCCATAT TTGTTTTTTT TTCTAAAAGA AAAAGTGTTT 
    AATATTAGCA AATGTTTTAC TCGTTTGATG AGTATAATTC GGCGAAGAGA 
    AGCCTGTATT TATAAAGGGA GAAGTCCCAC GTCAGCAATG TCCACGTGGA 
    CGAGAGTACT TTAGGTTAGA TATTTTGACT TGATCTTTGT TTGTAACAGG 
    GTTGTAGCCG AGACGGGGGA CAAAAGGTAC AGTCGACAAT AAGCTTATGT 
    TAGTTAATGG AGACATAAGG GACCCACATG TCACCGCCAC GTAAGAGTTT 
    TCACGGATGT TTTGGTTTTT GAATTTTTGT CTTATTGGTT TCATAGGCGT 
    CGTTCTGGAC TTACGTGGCA TAATTTGTTG GGACTCTTTC TTTGTTTGGT 
    CGTCGATAAT GACGGTCAAA AAAACTAATA AGCTTTGCTT ATAACGTTAT 
    TAACGGAGTG ACTTTAAGTT AATCAACGAT TAATTTATTT TTCATATTAT 
    GTATTGGAGC GTAGGGGATC ATGTTGTTGT GTTTGGAGGC AAGTTGATAA 
    TCTATGACGT AAAGTAATTT T

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17580009 [Map]; Strand: w
      • AT4G37390.1 - [+] show detail - Auxin-responsive GH3 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT17344 - 5-prime edge 
    GTCCCGGTGG TTACGTACGA AGATTTGAAG CCGGAGATTC AACGTATATC 
    CAACGGCGAT CGTTCTCCGA TCTTGTCTTC TCACCCCATC ACCGAGTTTC 
    TCACAAGGTA TAATAATTAA GTCAACTTTA TCAATGATTA ATATCGTTGT 
    TATAAACAAA TCAATTACGT GATTTTGATC ATAATATTAA ATTAGAAAAA 
    TACTTATAGA ATATTGCTGT TGACCGTAAT TTTTTTTTTA AATGGTAGGT 
    ATCTGCGGCT CAGGAACATC TGCTGGGGAG AGGAAACTAA TGCCGACAAT 
    TGAAAAAAAC TTAGACCGGC G

AT4G37390.1

Model type
Protein coding
Short Description
Auxin-responsive GH3 family protein
Curator Summary
Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.
Computational Description
BRU6; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT1G59500.1); Has 1707 Blast hits to 1543 proteins in 239 species: Archae - 1; Bacteria - 597; Metazoa - 55; Fungi - 2; Plants - 674; Viruses - 0; Other Eukaryotes - 378 (source: NCBI BLink).
Link
InterPro Scan - TAIR