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GT17424

CSHL Arabidopsis genetrap mutant lines

Original: GT17424

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17424

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1660818 [Map]; Strand: c
      • AT1G05570.2 - [+] show detail - callose synthase 1
        Distance: -1381; Region: intergenic
      • AT1G05575.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaer...
        Distance: 873; Region: intergenic
    Flanking Genome Sequence: GT17424 - 3-prime edge 
    CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATATATG 
    GTGACAGAGC TCAACTAACA TGCTGACGTT TTGTTTCTCT CGTTTAACAA 
    GGTCTCCCGT CATTTTCCTG TTTCTCTGAC ATTTGTAACA ATATACTAAT 
    TTCATTTAAG ATTGCATGTG AAGAAGATAG ACACAAAACA TTATCTCGTA 
    TTATTTTTCC AAGCAACGAT AGAAACATTG TCAACTTGAC CAAAATTTGT 
    TTTCAGCTTT CATTCTTTTT TTTTCATCAC GGTAATTTGC TCAGAGAAAC 
    ATTGTGGTAA CTCATATAGA ATTTATAGAA TTCATGGCTT AACAGGTGGA 
    AAATGTGACT TTTCAAATAT TTTTTTTAGG ATTAACATAT TTGACTAGTC 
    CGCTAGTTCG TATAATTATT GGAAGATATT TAATGATCAA AGTGGTCATG 
    GAGATTGGGA TATCCAACCA TAAAGATGGG CTTGATTCTA TAAATATCAT 
    CTTGGATGAC TCAAGTTGAA GCAAAATTTC AGTGTCTGAC CTGTGAGTGA 
    AAGTATTGAT ATTCTTTACA CAGCTCACAT CGGCGTTAGG ACTTGGGAGT 
    GACTAAATGT CACATGGGTA ACTCACTCAT AAGCTGGATT TTGGATGGGT 
    TCTACCTATG GGCCTTGTTG GGCTGGGTTA GATTTCATGG AAATCATGTC 
    AACTGTATTT ATCATGCATA AGTTTATGAC TCTTTTCTTG GAAAAATGGA 
    TATGTAAAAA ATATGCCATT ATGCAGCAGT GATGGATATA GTCTATAGAG 
    CCATAGAGGC AA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1660755 [Map]; Strand: c
      • AT1G05570.2 - [+] show detail - callose synthase 1
        Distance: -1318; Region: intergenic
      • AT1G05575.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaer...
        Distance: 936; Region: intergenic
    Flanking Genome Sequence: GT17424 - 5-prime edge 
    CTTTCTCCCT TCATATATTT AGTGCATATC TTTTGGAACT CTTCGTATAT 
    ATCACAAGCA TCAATAATAT TTTTTTCTAT CTTAACTCAT TTTTATTTAT 
    ATTAAAACCG TGTAAGGAAA TCGCCAGAAA TTGCAGACCT GTTTCGTCCT 
    TAATTGCGGA TCTCATCAAT AGGTTAAGTA GTGACAACTT GTTGCGAGGA 
    TAATAGTAGT GATGGTTTTC GAAGATGAGT TATCCCAAAA AAAGAAAACA 
    ATTGACGTGG TGATAATAAG TGATCAATAA TGTATGTAAA CATATGAATG 
    GTGAGAAACG TAAATGTTTA TTTTCCTAGT AATAGATAAG ATACTTCTAG 
    TTTAGAGTGG TCCACTACTG TCTCTTTAAC AAAGGCATGA TGAAAAAAAA 
    GTTCCTACTT GCAATTTCAT GTTTGTTTAA TTTTAGTATG ACTCAAAACT 
    TGAATTATTG ACCAATAATC TATTTGATGG

AT1G05570.2

Model type
Protein coding
Short Description
callose synthase 1
Curator Summary
Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.
Computational Description
callose synthase 1 (CALS1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 3 (TAIR:AT2G31960.2).
Link
InterPro Scan - TAIR

AT1G05575.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31945.1); Has 63 Blast hits to 63 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR