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GT17463

CSHL Arabidopsis genetrap mutant lines

Original: GT17463

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17463

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493129 [Map]; Strand: w
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17463 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACT TACCGTTTTC ATCCCTAGAG 
    AGATATATGA GAAACGGTAG AACAAACAAA AAAAAAAAAG GATTTGGGAA 
    ATTTCTTCCC GGTTTTTTTG GGTAAACAAG TTGGGGGAGA GATTTAAAAG 
    GTATGGGGGG TATTTATTTA GAAAAAAAAA AAAGTTGAAA ACTCTTAAGC 
    TCCTGGAAGG GCCTCCCAAA TCCAGGGTGG AAAAGTTTTA ACGGCTTTAA 
    ACCCGGTGGC CCTCTTCACT TTTTCCCCTT CCCTCTTTTC TTTCCAAACC 
    TTTGGTTTCG TTTCTTTTTT CCCCCCCAAA CCAAACCTTA AAATTCTTTA 
    AAATTCTTTT CCCCCCGACA

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR