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GT17473

CSHL Arabidopsis genetrap mutant lines

Original: GT17473

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17473

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4123844 [Map]; Strand: c
      • AT3G12920.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
        Distance: -336; Region: promoter
    Flanking Genome Sequence: GT17473 - 5-prime edge 
    TCCTACTTTC TCCCTGCATA AAATTAAAGA CGAAGCAGAA AAGAGAAGAG 
    TTAGGCGAAA AAAGAGAGAA ATAGGAAGTT TAAAGTAAAA AAACCAGAGA 
    AAGTAAAAGA GCAGATATAG AAATTATGAT TTTGACCGTA ACCTCTGAAC 
    CAAAGATTTT ACAGCTGTCC TTGTCAAAGT TTTTTTTTGT TTAATTCTCT 
    CATGAAAAAA CGCTGGAAAA GGCAACTACT TTAATGGTCA CTGGTCAGCC 
    GGATATAACC AAAAAATCCT CATGCTTAAT TAAAATTATT AAAAAAATTG 
    ATAGTAGAAA ACAACAAAAT GCCATTTACA GAAAAATAAA TAAAATAAAA 
    CATCGCATCT TCCTCTCTGT TCTCTAAAAA TTGGCAAACA AGAGTGTGTG 
    GGGTTCTGCT TTGATATTTG TTTTTTAGTT TCTCCTTCTC TCTGCAAAAA 
    CCGTAATTAA AAACCCCCAC AACTTCTTCA ACATAACGTC TTCTTCTTCC 
    ATCTTTTGTT GCATTCACGT TTTTAAAGGT TCTCTGAATC CCTC

AT3G12920.1

Model type
Protein coding
Short Description
SBP (S-ribonuclease binding protein) family protein
Computational Description
SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink).
Link
InterPro Scan - TAIR