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GT17499

CSHL Arabidopsis genetrap mutant lines

Original: GT17499

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17499

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108757 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -146; Region: promoter
    Flanking Genome Sequence: GT17499 - 3-prime edge 
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTGGT 
    TTTCTTCTTA TTCATCTCAC TCGACGACAA GTTGGGAAAC AAAACAAAAC 
    TCGCAAGTTT AACAACGCGT CTTCTACCTC CTCCTCATCG GACTATTTAT 
    CTATAGTCTT CGTTAGATCA ATTCCTCTGT TTTACTCCTA AGTTTCGAGA 
    TCCACATTTC TTTTTAACCT CATCTCATCT CTTAGTCGAG ATCTTCACTT 
    TCTGATGACA ATAGGGTCGT TTTTCTCTTC TCTCTTATTC TGGCGCAATT 
    CTCAGGTAAC CTCAATCGAC TATTCTCTGT TCTACTCCTT TTTTCTTTAT 
    CATTTTAAAA ATCCTAACAT TGAAAATAAA GTAGTTAAAT AGAGTCAACG 
    AAAACATTGT TAATGAAACA GTGGTGTGCT TAGCATAACG AATCAGACAG 
    ACAAAAAGTG TCTGGATCCG TAGAGCAAAG TGTTGTCGTG TCTTTGACAA 
    AGTTCTTTGT TTGCCTAAAC CAATTTGTTC ATCCGATAGA ATGAATTGCA 
    TTCCGTTGTT ACTATCATCC AAACCGGAGA TGTCAAGCCC TAACCCTCAA 
    GTAGTATTTC TTAGAGAGCC ATGAATTGTT TGTTTAGATC CAATTAGAAG 
    AAGGTTTAGT TGACTGTGAT GA

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR