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GT17509

CSHL Arabidopsis genetrap mutant lines

Original: GT17509

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17509

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 480393 [Map]; Strand: c
      • AT2G02020.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon5 (CDS)
      • AT2G02020.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: GT17509 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CTGATTGCAT 
    TGCTCTGTCA CAAAAGAAGC TTCGGATTAT TAATTCTAAA AAGGACTATT 
    TACAAATATA GCCCTTTCTT TTTGCCAATT TTTATTAAAA AATAAATAAA 
    CTACTTTACT TTAACGTTTT TTTTTCTGAA CACCTTCATT CTCACTCGAC 
    CAAATCCCTC CCGCAACTCT CGGGATGTTC GACACTGCAA GTGTTCTCAT 
    ATCTGTCCCA ATCTATGACC GCGTCATCGT TCCCTTAGTG AGACAGTTCA 
    CAGGCTTAGC TAAAGGATTC ACCGAGCTAC AAAGAATGGG GATTGGTCTT 
    TTTGTCTCTG TTTTGAGCTT GACATTTGCA GCTATCGTTG AGACGGTTCG 
    GTTACAGTTA GCTAGAGATC TTGATCTAGT GGAAAGTGGA GACATTGTTC 
    CATTAAACAT CTTTTGGCAA ATCCCTCAGT ACTTTTTAAT GGGCACTGCT 
    GGAGTTTTCT TCTTTGTTGG GAGGATTGAG TTTTTCTATG AGCAATCTCC 
    AGATTCAATG AGAAGCTTGT GTAGTGCTTG GGCTCTTCTC ACTACTACAC 
    TAGGAAACTA CTTGAGCTCG TTGATCATTA CCCTTGTGGC GTATTTGAGC 
    GGAAAAGATT GTTGGATTCC TTCAGACAAC ATTAACAATG GACATCTTGA 
    TTACTTCTTC TGGCTTTTGG TCAGTCTTGG ATCTGTTAAC ATACCTGTTT 
    TTG

AT2G02020.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 2 (TAIR:AT2G02040.1); Has 8051 Blast hits to 7680 proteins in 1472 species: Archae - 0; Bacteria - 4049; Metazoa - 790; Fungi - 469; Plants - 2161; Viruses - 0; Other Eukaryotes - 582 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02020.2

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1).
Link
InterPro Scan - TAIR