1. Home
  2. Mutant Lines
  3. GT17526

GT17526

CSHL Arabidopsis genetrap mutant lines

Original: GT17526

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17526

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1853407 [Map]; Strand: c
      • AT3G06130.2 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: intron4 (CDS)
      • AT3G06130.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT17526 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATCCCCAT 
    CGGACCACCC ATACCCATTT GACCACCCAT TGGCATGCTC ATATTCTGTG 
    GTCCTCCGCC TCCCATGGGT CGGAAACCTC CCGAAACTCC TCCAGCCATG 
    GGCCCACCTC CGCCGTTACC CTTTTTTCCG GCGTTGGGAC CACCGCCTCC 
    ACCGCCGTTT TTGCCATCTT GTGGATGTCC ACCACCGCCG TTCTTGCCTC 
    CACCTTGGTT TTGATTCCCA GGACCACCCT TAGCACCGCC GCCAGCACCC 
    TTTCCACCAC CGGCACCGCC GCCGCCAGCA GCGGGAGCGC CTTTACCGCC 
    GTTTTTAGCA GGACCACCGG CAAGATTGGC ATTCTTCTGA GCGTTCATCA 
    TCATCTGTTG AGCATTAGGC ATCATCGTCA TGTTGGGC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15971456 [Map]; Strand: c
      • AT4G33090.1 - [+] show detail - aminopeptidase M1
        Distance: -1000; Region: promoter
      • AT4G33100.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/a...
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT17526 - 5-prime edge 
    AACCGAGAAA TATTTTCCAA GATGACCAAA AGACAACTAA GAGATTCGTT 
    TTTGATACTC TAAAAATATA AATGAACATA ACCAAAGTTG CGGAAAGAAT 
    CAAATAGAGA GATTGTATCA AAAATGAAAC TCAGACAATG CAAAGTTTTA 
    AGAAGTATGA AGCTTTTCAA GGATAATAGA ATTTCAATAC CCAAAAAAAA

AT3G06130.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.1); Has 122077 Blast hits to 41053 proteins in 2213 species: Archae - 188; Bacteria - 33817; Metazoa - 49902; Fungi - 6812; Plants - 10774; Viruses - 1540; Other Eukaryotes - 19044 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G06130.2

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: Heavy metal transport/detoxification superfamily protein (TAIR:AT5G19090.3).
Link
InterPro Scan - TAIR

AT4G33090.1

Model type
Protein coding
Short Description
aminopeptidase M1
Curator Summary
encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).
Computational Description
aminopeptidase M1 (APM1); FUNCTIONS IN: aminopeptidase activity; INVOLVED IN: auxin polar transport; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, puromycin-sensitive aminopeptidase (InterPro:IPR015568), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782); BEST Arabidopsis thaliana protein match is: Peptidase M1 family protein (TAIR:AT1G63770.3); Has 9205 Blast hits to 9101 proteins in 1870 species: Archae - 122; Bacteria - 4443; Metazoa - 2260; Fungi - 495; Plants - 237; Viruses - 0; Other Eukaryotes - 1648 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G33100.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR