Home
Mutant Lines
GT17648

GT17648

CSHL Arabidopsis genetrap mutant lines

Original: GT17648

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17648

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 506601 [Map]; Strand: w
- AT4G01190.1 - [+] show detail - phosphatidylinositol phosphate kinase 10
  Distance: -470; Region: promoter
- AT4G01200.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: 0; Region: exon1 (3UTR)

CGGTAGAGGT TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGTTCTA 
GTTGCTCAAA ACATTATATT CAATAATTGT TGTGTCGTTT TTGAACAATT 
AAAAAATCTT TTTGATATGA AATAGTAATA ATTCGTAGAT CACAGAAAAA 
AAGTGTAGTA AAAATTATGT AAAAAGTGAA AGAAAAAAAA CGCGGGAAGT 
CGTTTATGAA GTTTTGAGGA GATAATTGTT AGTTTAACGG CTGGATTAGT 
TAAAACCACT AATTACGTCC TACCAGAAAT AACAAAATCA TCATCTTTTA 
TAAAAAAATC AATCACTCTC TCTTGTCT

5 prime edge [+] show sequence

Chromosome: 4; Position: 506664 [Map]; Strand: w
- AT4G01190.1 - [+] show detail - phosphatidylinositol phosphate kinase 10
  Distance: -533; Region: promoter
- AT4G01200.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: 0; Region: exon1 (3UTR)

CTTTCTCCCT GACTAGAATA AAGAATTCCA AACTGTTTGT TAACTAACAC 
TCATAACCGC CAAAACTGCC TAAACGACGA CGTAAGGGAT AAGGAGACCT 
GAACCGTTGA CAGAGATGCA CGTGACGAAG ATCGATGGTT TAGAAAACCA 
AAGGAACATC TGAACCGTTG GAAATTCAAG ACAACAGATC TCAGCCGTCC 
GTCATTTTTC TTCTTGGTGG TAACATGCCC GACGATTTCA TCAAGAAACA 
GCACATCAAT CCTCCGCCGT CCGATGACGA TCGCACGTGA TTCTTTCCCG 
CCAAATTTCG AACAGCGTTC CAGTCTCTGA GAGGAGACGG CATCGGAGAA 
GATGCCGTCG AGTCAGTACC GTCGTCGGAG AAATTAACCG ATCCGCAAAC 
CGAATTCTCT TTCGAACTCT CACCGTCGTC AGCGGAACCG TTCTCCGACG 
AACTAACCGC AGATCTAGAC TTTCTCATTT TCCGACTCCG ACGGATCTCT 
TGAACCGACT TGAAGAAATC AGCTGGAAGT TCAGAAGCAT CCATCACCAT 
AGCCGCGATG TTAAGAACGC CGTGAAACTT TCCAGAAGGA CGACGGATCT 
GAAGCGCGAC GAGAGATGGA ACTTTCACGG CGGCGGTTGG GAGGAAGTTA 
CTCACGAGGA AGCGAACAGT TCCGATCAGA TGATCTCGCA AGTAACCAAC 
GGCGTAGATC TCGATTGAAA CACCAGAAGT TTCGCTAGAT AGAAACTCCG

AT4G01190.1

Model type: Protein coding
Short Description: phosphatidylinositol phosphate kinase 10
Curator Summary: Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.
Computational Description: phosphatidylinositol phosphate kinase 10 (PIPK10); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol-4-phosphate 5-kinase, core (TAIR:AT1G01460.1); Has 1758 Blast hits to 1594 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 739; Fungi - 277; Plants - 390; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01200.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 277 Blast hits to 277 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR