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GT17670

CSHL Arabidopsis genetrap mutant lines

Original: GT17670

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17670

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 168484 [Map]; Strand: w
      • AT1G01453.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -642; Region: promoter
      • AT1G01453.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -642; Region: promoter
      • AT1G01460.1 - [+] show detail - Phosphatidylinositol-4-phosphate 5-kinase, core
        Distance: -239; Region: promoter
    Flanking Genome Sequence: GT17670 - 5-prime edge
    CCTACTTTCT CCCTGTGATC ATGGTCAAGA TTTGGCTAAG TTGAACTTAA 
    AGACATGTCG AGTTTGATTG GGTAGTTTTT GTTTATGGGC CTTGTCTTAA
    GCTATGGGCC TTGTGAGTAA TATAATAATA ACTAAAACGA GTAACGGAAA
    TGAATGAAAC AGAAGACGCG GGAATTGGTT TTTCCCGTCT TTGAAAACAG
    AGGAAAATGA GTTGGATCGA GCGGCGAACT TCGACGGCCA AATTTGGCAA
    AACAATTGTT TTTCTCAACA CAAACAAATA AAGAAACAAA ACAGAAATCT
    TCTTCTTCTT CATTTTTAAA ATTTCTTGTT TCTTTTAAAA TTCAACGCAC
    TCTTCTTCTT CTCCCTCCTC CTCTCTCGTT TACCCAGCTC CTGGAACAGG
    TAACAACCTC TTCCTCTCAT TTTTTGTTTA CCGGATCTTA TGCGAATTTG
    ATCATGATAT ATTTGTGTTG GTATGATCAA TTATTGTGTT CGATTTCTAG
    GGTTTTGAGC CGAACAATTT TTAGGGTTCT CCGTTTTCAT GTTGTCCCTC
    AATTCCATAA ATTTTGGATC TATATCTGCA GATTTATGTC AATTTCTTAT
    TGAAAAATGT GGGATTATTT CTTCTAATGT ATAGGAGTAT ACAAATTAAA
    AGATGTGGGC ATAGATGAGA TTTGATATCA GGAGAAGTTG AGAGAGAGAG
    GGTAAATTTG GAAATGTTTA CGCGGGAGAT AACAGCAAAG GACGTGAAAG
    C

AT1G01453.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01453.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G01460.1

Model type
Protein coding
Short Description
Phosphatidylinositol-4-phosphate 5-kinase, core
Curator Summary
Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
Computational Description
PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).
Link
InterPro Scan - TAIR