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GT17734

CSHL Arabidopsis genetrap mutant lines

Original: GT17734

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17734

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17734 - 3-prime edge
    TTTCATCCCT AGCTGTCACC AGCCCAACTT TCATGTA
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4876412 [Map]; Strand: c
      • AT3G14520.1 - [+] show detail - Terpenoid cyclases/Protein prenyltransferases superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT17734 - 3-prime edge
    TAGAAGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGCTGTCAC 
    CAACCCAACT TTCATGTACT CATCAAAGGA TGGTACGTGG CCCGTTCGTG
    CCCACTCTGT TAACTGTTTG TCCGCCTTTG CTACGTTCTT GAACTGTGTT
    TTAGAATCCA AGAACTAATT AGATTCCACT AACTATACAT ATACATTAAT
    TGGCTTCATA TTCATCTCAC TCGGCTACAA TACCCTTTCC AACACTTGTT
    TCACGCCGTA TGATCTTCCT TTCGGTCTCA ATATCTTGTT
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17734 - 5-prime edge
    GGAAATGTTA ACAAACAACA AGCTTTTGGG AGAATTTGA

AT3G14520.1

Model type
Protein coding
Short Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Computational Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14540.1); Has 1704 Blast hits to 1673 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1700; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR