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GT17774

CSHL Arabidopsis genetrap mutant lines

Original: GT17774

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17774

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 324267 [Map]; Strand: w
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: -285; Region: promoter
    Flanking Genome Sequence: GT17774 - 3-prime edge
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAAAT 
    AGTAATACAC AAGTAGTGTT CTTACCAAAG AAATAAATAA TAGAGTAATT
    ACTAGTTTGT ATATGTACTA ATTACTAGTT TAATCGTGGT CATTGTAATC
    CTTTTAAAAT GTGCACCACG ATGATATTAA AAAGTTGTAT CATCGATAGT
    GTAAAAAAAG AAAGTGGTCA CTCACTTTAT TGTGTTACAG TTTCCGTAAG
    TAGGTGTTTG GGTTTGACAC CAAATAAAGA AGAGAGAAAC CTGCTTTTTT
    CAAACATTAT CGCACGCTTC GAGATCTGGG ATCTCTTGCA AAACAAACCA
    AAATTTTAAA ATGGGCCTAT ATGTTTTCGG CCCAATAGTT TCACTTAACG
    ATAGCACCTC TTATATTTTC CTCTTCATCA ATTTTAAACT CCAACTAAAG
    AATCTGTCAA ATTGAAACCA AAAATAATAA TATTACAGAG ACACAAATTT
    GCCAACTTAT TCATGGTCAT TTTATACACG TTCAAACAAA AAAAAAAAAA
    AACCCCGAAC CCCCCCAAGG ATTTGGCCCC CCCCCGGGGA AACCAAAGGG
    TGAAAAAAAT TAAAAAAAAA TTTTTCCTTA AAAAACAACC ACTCCTCTTC
    CAAAAAAAAC CCCCACCCCC CCCTTTGGGT
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 324321 [Map]; Strand: w
      • AT5G01840.1 - [+] show detail - ovate family protein 1
        Distance: -231; Region: promoter
    Flanking Genome Sequence: GT17774 - 5-prime edge
    CCTACTTTCT CTCTGTCACT AATACTAAAA CATATAATAA AAGTGTCAGT 
    GTCAAATGTC AATGTAATTT AATTTAGGGG AAATGAAATG GCCAACATAA
    TCTAACACAA AATCAATGAA AATGGAGAGA GCATCTCACT CACCTTATAA
    TAACCCTTAT ATTTTTCCAC GTACGTGGGC CCCCTCACAT AAACCTCTCT
    TTCCTTTATA ATCTCTCCAC TCTTCACACT CTCACTTTTG TTCATGTACC
    AAAGAAGTCC CCAACAAACA CAAAATAATC AACAGAGAGA GTCAGAGAGA
    TAATGGGTAA TAACTATCGG TTTAAGCTAT CGGAGTTAAT CCCTAACGCT
    TGGTTTTACA AACTTAGAGA CATGTCCAAA TCCAAGAAGA AGAATCTTCA
    GAGCCAACCA AATAGCACCA CCTCCAAGAA GAAACACCAC GCAGTCTCTA
    CTCCTACGTC CACAACGCCA CTCAGTCCTA GGCCTCCTAG GCGCCCTTCT
    CACTCTTCCA AAGCGCCACC CTCCCATCCT CCCAGGAAGT CCTCCGGGAA
    CCGTCTTCTC ACCGGAGCCA CCGTCGACTC TAAGTCTTCC ACGACTTCCG
    GCGACAGCAC TACCACAGAA ACA

AT5G01840.1

Model type
Protein coding
Short Description
ovate family protein 1
Curator Summary
Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.
Computational Description
ovate family protein 1 (OFP1); FUNCTIONS IN: protein binding, transcription repressor activity; INVOLVED IN: N-terminal protein myristoylation, regulation of unidimensional cell growth; LOCATED IN: nucleolus, cytoskeleton; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 3 (TAIR:AT5G58360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR