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Mutant Lines
GT17782

GT17782

CSHL Arabidopsis genetrap mutant lines

Original: GT17782

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17782

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2519533 [Map]; Strand: c
- AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -158; Region: promoter
- AT3G07890.2 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -383; Region: promoter

CGGTAGAGGA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGAGATT 
GGATAAGTAA GAGAGTCATT AGTGACGCAG GTTTAACTTT GAATCATTGT 
TATGGCAGCA AGATTATGAA TTTCTCCTTA CTTTTCGTTA AATGACTATT 
ATAGCCCTGA ACTTTGTTTG TATTGATTGG CTCTGTCATT TCTAAGGACA 
AATGTGTAAT TTCATAAACG ATGTGTTAAA TAAAGCAATT TCTTGATGTC 
CCTCCCACCT CGACGATTGC NAGATAGAGA GAGAAAGAGA CGATGTAAAA 
TAATTATTAA CACTGGATTT ATTAAATTTT AAATTTCAAA TTCCACAATT 
CGTCGGTAAT AAAACGTGCT GAAGTGACAT ATAGCATATG TATCTAATGT 
GATGTTCATA TGATAAAGAC AGGTACATTT TTCTACGATT AATTGTAATA 
TACATATTAT TCTATGGTTT GAGAACAATG TATATGGTAT CCCATAATTG 
ATTTTATTAT CAGTTTTGCT TCAAAGATAC GTGAGTCCAC GACTCCACTA 
ACCTTGATAA ACTTTGAGTC TCTAACTCTA ACCTTTGTTT ATCCCTCCCA 
AATCGTTCAA ACTATACAAT ATGCATATAT G

5 prime edge [+] show sequence

Chromosome: 3; Position: 2519464 [Map]; Strand: c
- AT3G07890.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -89; Region: promoter
- AT3G07890.2 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -314; Region: promoter

CCTACTTTCT CTACGTAGTT GTAAATAGTA ACGTTTCAAA ATCACAATCT 
TTCAGTAATA TTATAAAATA ACCCCATAAA AATTAAAAGC TCTCAATCCA 
ACCCCAGCTC TATCTAAAGT TAGGGATAAA CTCTCCCATT TCCTCAACAA 
TCAAAAGCTC TCTCTCCTCC AAATTCCAAC TCTCATAATT TCTCTTCTTC 
GACAACCGAG AGACGCGGAG ATTCAATTCA ACGCTCCTCT GGATTTTTTT 
GCATTTCTTT CAGTTATAAT TATTTTCCTT TTTCTTTTCT TTCCTTATTT 
CTATTTATTT AAAGTTGTTT TAATTCTCCT TTTCCAACTT TAGTGCCATT 
TGTTCACGAG ATAGAGAAAT CATAAAAAAG AAATCATCTG TTCTTAGCTT 
CTTTTAGTTT CTGGAAATAT CTCTTTTTTT AACAGAAGCT GTAATTTTTT 
TTGACTGCGT AGAGGAGAAG AAGATTAGAG GTGTTCAAAG GTGATAACGT 
TTGCAGAACG TGACCACAAT TATAATATTG AAAGGTATCA GAAAACTTTG 
CTAAGATTTA TTATAAACTC CTTTTTTATT TAAATTCAAG AGATATCAAA 
CAACTACTTC ATTTTTTTTT

AT3G07890.1

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G07890.2

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G37290.1); Has 5103 Blast hits to 5093 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 2600; Fungi - 1061; Plants - 534; Viruses - 0; Other Eukaryotes - 908 (source: NCBI BLink).
Link: InterPro Scan - TAIR