1. Home
  2. Mutant Lines
  3. GT17803

GT17803

CSHL Arabidopsis genetrap mutant lines

Original: GT17803

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT17803

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17803 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCGAGG 
    GAAGGA
  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT17803 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTACT 
    CGAAGGAAGG AGTGTGTA
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2451463 [Map]; Strand: w
      • AT4G04840.1 - [+] show detail - methionine sulfoxide reductase B6
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: GT17803 - 5-prime edge
    GAACGTTGTG TTCTTCAATT CATCGCATTT ATGAACTATT ATAAAATTGA 
    ATGATTTGTG TTTTCATTAT TTTTAGAAAT GCTTATGTAC GTATCATTGA
    AATTGTTTGT GTCATATATT GTGCCATTTT TCTATTGAGT GTTAATGTAT
    TATCGAATTT ACCAAAATTA TATATAGTTA TTGTCTAAGT CTGCGAATCA
    TTTGCCATTT GGATACACAT GCCTGTCTAA ACAAACGTAC ACATGGGGAT
    GTGACCGAAC TATTTTTTCG TTTGTATGTT TATACTTTTG GATTATATAT
    AACACCCGTG AAGAGTTTTC CCGTCGTTAA ATTTACACGA GAATAATTTA
    ATGATTGTAT TCCAAAAAAA ATACCAATAC TTGCTTCTTT

AT4G04840.1

Model type
Protein coding
Short Description
methionine sulfoxide reductase B6
Computational Description
methionine sulfoxide reductase B6 (MSRB6); FUNCTIONS IN: peptide-methionine-(S)-S-oxide reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Methionine sulphoxide reductase B (InterPro:IPR002579), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: methionine sulfoxide reductase B9 (TAIR:AT4G21850.1); Has 8335 Blast hits to 8332 proteins in 2250 species: Archae - 76; Bacteria - 4945; Metazoa - 267; Fungi - 135; Plants - 207; Viruses - 1; Other Eukaryotes - 2704 (source: NCBI BLink).
Link
InterPro Scan - TAIR