1. Home
  2. Mutant Lines
  3. GT17817

GT17817

CSHL Arabidopsis genetrap mutant lines

Original: GT17817

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17817

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1543324 [Map]; Strand: c
      • AT2G04450.1 - [+] show detail - nudix hydrolase homolog 6
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT17817 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTAATTGTGA 
    AAATGCCTCT TTGGTTCCAA AGTCGCTGTG TAACTTATGA GAGAGTGACT 
    GTTCCGTTGA CAGAGCAAAA TGGCCCAAAT CTATTGAAAA CCCCAAAAAC 
    CTTAATTTGG AATCTCATCT CATTTTGCTT CTGTTCTTTT CCAAGCAATT 
    TCAACAAAGT TTGAAACTTT AAGTCTGTGT AGCAACTCAA TTACATGAAA 
    ATTCTTAAAA GTCTACTCTT TAAGTCGTCC TCTGGGCTGA AACTCTCAGC 
    TTCTTGTTAT AAAACCTGAA GTTCAAATCA TTCCAATACC ACAAATAACT 
    CAACTTTCTT CAAGGTATGT CTTCTCTTAC TCACATTTGA TTTTGGGAAC 
    TTGAGTTTTC TTAGAATATG GATTGGTTCT TTTTGTAGCA TGGACAGTGA 
    AGCTCAGGAG TCCCTTTTAC TTCAAGGGGT TGCAGATAAT TATGGAGGTG 
    TTAAGGTGAA CTTGACAGAA CCAATGACTA TTGAGGATTT TGTCCCAAAG 
    CTGAGAGCTT CACTTGTGTA TTGGAGCAAT CAGGTATTTC ATTAATAGAC 
    CACTTCAGAT TTGAGACTTA GAGAGACTCT TTAGAAGACA CTTGTAGTCT 
    AGTGGCAATG AGTTGAGACA TGTATTTGCA GGGGACGAAG GGGATATGGT 
    TAAAGCTTGC CGATGGGCTT GACAATCTTA TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1542949 [Map]; Strand: c
      • AT2G04450.1 - [+] show detail - nudix hydrolase homolog 6
        Distance: -371; Region: promoter
    Flanking Genome Sequence: GT17817 - 5-prime edge 
    CTTTCTCCCT GTTCCAATCT TGAAGACATT GGTTCGATTT CGCTAAGACT 
    GTTTAAGAAC CAAACCGAAA TTTTTCCGGT CTAGTCTGGT TTAGTTTTCC 
    ACTGGTTTGG TTTTCTGTCA AAAATGTATT TTTTCTGTAC TCTAAAATAT 
    ACCAATCAAT TCGTTACTGT AGGGTTTAAA AAAATATATA TATATCAGAC 
    CAAAGAAAAA TTTAAAAACA AAATAATTAA GAGTCTTATA CAACAAGTTA 
    GGTTACAGGA GAAAAGGAGA AAGAGGGTTA GGTTAAATAG AGAAACACTT 
    TCTCAAAAGA GTTGTGAAGA GTGAGGTAGA ACTATGATCA GGCTTTCCTT 
    TGAGAAAGTA CGCGTGGTCG GTGCTGCAGT AAAGATAGCT CTCCTTACCA 
    GTTGAATTCT TGGTAAGGAC ATTGGAGAAA CCTAAGTA

AT2G04450.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 6
Curator Summary
Encodes a protein with NADH pyrophosphatase activity. Although this protein was also shown to have ADP-ribose diphosphatase activity in vitro, mutant analyses suggest that NUDX6 is involved in NADH metabolism in vivo.
Computational Description
nudix hydrolase homolog 6 (NUDT6); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding, NADH pyrophosphatase activity; INVOLVED IN: response to other organism, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: MutT/nudix family protein (TAIR:AT4G12720.3); Has 2998 Blast hits to 2996 proteins in 719 species: Archae - 33; Bacteria - 1649; Metazoa - 236; Fungi - 25; Plants - 166; Viruses - 14; Other Eukaryotes - 875 (source: NCBI BLink).
Link
InterPro Scan - TAIR