Home
Mutant Lines
GT17821

GT17821

CSHL Arabidopsis genetrap mutant lines

Original: GT17821

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT17821

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 409170 [Map]; Strand: c
- AT4G00950.1 - [+] show detail - Protein of unknown function (DUF688)
  Distance: -2028; Region: intergenic
- AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -2948; Region: intergenic

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATACAC 
ACATTCTACC CGACCGGATC GTATCGGTAT ATCAATCTCA TCTCGACGAA 
CAAAAAAAAG AAGATCTACA TATTCTGAGT TTCTACCGTT TTTAGAATAA 
ATTAAAATCT GGAAAGGAGA ATGATATAGT TCAAAATGAC TCACGATTTT 
AATCAGAGAG TACACTGAAT TGGGAGAAAA AGCTATTCAG TGGAAGTAGA 
AAAGATAAAG ATTCATCCAG TAACTGTTGA TACGGAAATT ACCTTCTCAT 
TTTGTGAATG ATTGTTCCTA ATATCTCTGT TGAACAATGT TTCTGTTGAA 
TACCAAAAAC ATGGGAATTA ATTAGCAACT CTTCCTAGAT ATTCTGCAAA 
TTAAGAATAG ACTAAAGGAA CTAGAACTCC ATAGCCGAGA AAAAAAAATC 
ATATGGTGGA CTCATGTAGT ACGGTTCAAG GACAAGACTA CTGCAAAATG 
AACACTACGC TATGATCTAA TAGCTTATGC ATACTTTTTT TTTGGGAAAA 
GGGTAA

5 prime edge [+] show sequence

Chromosome: 4; Position: 408986 [Map]; Strand: c
- AT4G00950.1 - [+] show detail - Protein of unknown function (DUF688)
  Distance: -1844; Region: intergenic
- AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -3132; Region: intergenic

ATGTAGATAA ATAAGTTTAA TTTGCTGACC TTTTTGGTTC TATGATTTGA 
AATTATTCTC TGAGACATAT TCTTGATTGA TCAAGTTCTT TTTCACCTTT 
TATGTCCCTC TTTTTCCCCT ATAATTCAAA TCAGATTCTT CTTTTATGAT 
ATTACATCTA GTTCTTTGTT TTTTGAAATT GATAAGTGGA GGGATAACAA 
CGAGACTGGA CATGGAAGAA AGTTCCAAAA TAAAGTAGCT CATAGTCTGA 
GGATAATAAT CTTTAAATGT TTCTTTGGAA CCTTCATTTT CATTTCTTTA 
TTACTTTTGT TTCTGNCCTG GTGCTCGTTT CAAATCGAGT CCATTGCATT 
ACAAAACTCT CTTTCGGGCC TTTGTGCTCT GCCTTAATTT TCTTTTGTTA 
TTTACTCTTT TCTTTGTCAG AACAACAACA ATATCTAGGC AAATAAAAGA 
GGTTTTTAAA TTCTATAATC GTTATCATAG TTTCATTATT TCTATATGTT 
TAGACAGAAA TGTTGTCTTG ATTGAAATCA AGTTCTTTCT TA

AT4G00950.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF688)
Computational Description: maternal effect embryo arrest 47 (MEE47); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00955.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR